Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00361 ATGCTGTCTTCAAATGTTGTTCCATCATCATCATCCCCTCTCACTTTCACCAAACCCAAACCCAATTTCTTCCTCAATGCATCTCCGCATCTCAAACCAAATCTTCTCACAAGGTTTCAGACCCAACACAGACCCAATCCTCTTCAAAGTTCCAAACTTTCTTTCGCCCCAACATCTCAGATCCAACATGCAATCTCAAAGGTAAGATCTTTCAACGGATTCCTTCAACCCTCGTCAAAACCCAGCCTTCAAATCGTTAAGGCTGCGTCTGAAACCAATCCCGGAGGAGGAGAAAATGTTGCCCCCAAATCGAAGAATCTCAAACTTGCTCTGGTGTTTGGGCTATGGTACTTCCAAAACATCGTGTTCAACATTTACAACAAGAAGGTGTTGAACATATTCCCTTTCCCATGGCTTCTTGCTTCTTTTCAGCTCTTGGTTGGGTCCATTTGGATGCTGGTGCTTTGGTCCTCCAAGCTCCAACCTTGTCCCAAAATCTCGAAACCCTTCATCGTTGCTCTCCTCGGACCTGCTTTGTTCCACACAATAGGCCACATTTCAGCGTGTGTGTCATTCTCCAAGGTGGCTGTGTCCTTCACCCATGTCATCAAATCTGCAGAACCGGTTTTCTCTGTCATATTTTCTTCCGTCCTCGGTGATAAGTACCCCATTCAGGTTTGGCTCTCCATTCTACCCATTGTGCTTGGTTGTTCTTTAGCTGCTGTTACCGAGGTGTCTTTCAATGTACAAGGATTGTGGGGTGCCCTTATCAGCAATGTTGGTTTTGTGTTGAGGAACATCTACTCCAAGAAAAGTTTGCAGAATTTCAAGGAAGTTGATGGCTTAAACTTGTATGGTTGGATTACTATTCTTTCATTCCTCTACCTTTTTCCAGTGGCTGTTTTTGTTGAAGGGTCTCAGTGGATCCCTGGCTATTACAAGGCCATTGAAGCTATTGGCAAACCATCCACATTTTATTTCTGGGTGCTGTTATCTGGGGTTTTCTACCATCTTTATAACCAATCATCGTACCAAGCACTTGATGAAATTAGTCCATTGAGTTTCTCTGTGGGAAACACAATGAAAAGAGTGGTGGTGATTGTATCTACGGTTTTGGTGTTCAGGAACCCTGTTCGACCTCTTAATGGCCTTGGTTCTGCCATTGCAATTCTTGGGACCTTCCTGTATTCTCAGGCCACATCCAAAAAGAAAGAAAAGAAAATTGAAGAGGAAAAGAGTAGTTAG 1245 0.4378 MLSSNVVPSSSSPLTFTKPKPNFFLNASPHLKPNLLTRFQTQHRPNPLQSSKLSFAPTSQIQHAISKVRSFNGFLQPSSKPSLQIVKAASETNPGGGENVAPKSKNLKLALVFGLWYFQNIVFNIYNKKVLNIFPFPWLLASFQLLVGSIWMLVLWSSKLQPCPKISKPFIVALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSSVLGDKYPIQVWLSILPIVLGCSLAAVTEVSFNVQGLWGALISNVGFVLRNIYSKKSLQNFKEVDGLNLYGWITILSFLYLFPVAVFVEGSQWIPGYYKAIEAIGKPSTFYFWVLLSGVFYHLYNQSSYQALDEISPLSFSVGNTMKRVVVIVSTVLVFRNPVRPLNGLGSAIAILGTFLYSQATSKKKEKKIEEEKSS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00361 414 PANTHER SOLUTE CARRIER FAMILY 35 108 403 - -
Viun1g00361 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 288 400 - -
Viun1g00361 414 Pfam Triose-phosphate Transporter family 107 397 IPR004853 -
Viun1g00361 414 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 107 407 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00361 Viun-Chr1 2572339 2574034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00361 25 412 Antiporters AT5G17630 68.675 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00361 K15283 - gmx:100101869 686.026