Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00341 ATGGTTGATCAGGTCCAACACCCTTCAATCATGGACAAGGTTGCTGGTCAGCTCCATCTACGTTCGGGTTTTTCATCTGGTATTAAGAGTTATGATGGAGCCTTCCACCACCCTGCCATGTACCAAAGACCCTCTTTTGGGAACTACTCAAATGCTGCATTGCAGTATCCTGTGATGTCCTCATGCAAAACTACTATGGATTTGTCTGCTGCTGCAACAACAACTTCCCCTGTTTTTGCCGCAGCCCCAGCAGAGAAAGGCCATTTTCTTATTGACTTTCTCATGGGAGGTGTTTCTGCAGCTGTCTCAAAAACTGCTGCTGCTCCCATTGAGCGTGTTAAGCTTTTGATCCAGAACCAGGATGAGATGATCAAAACTGGAAGGCTTTCTGAGCCCTACAAGGGTATTGGTGATTGTTTTAAAAGAACAATGGCGGATGAGGGTGCTATTTCTCTATGGAGAGGAAACACTGCAAATGTCATCCGTTATTTCCCCACCCAGGCTTTGAACTTTGCATTCAAGGACTATTTCAAGAGGCTATTCAACTTCAAGAAGGACAGAGATGGCTACTGGAAGTGGTTTGCTGGCAACTTGGCCTCTGGAGGTGCTGCTGGTGCATCATCCCTCTTTTTCGTTTACTCCCTTGACTATGCCCGTACCCGTCTTGCCAATGATGCTAAGGCTGCAAAGAAGGGAGGAGAGAGACAATTCAAGGGTCTTGTTGATGTCTACAGGAAGACATTGGCATCTGATGGTATTGCCGGTCTCTACCGTGGTTTTAACCTCTCATGTGTTGGAATCATCGTGTATCGTGGTCTGTATTTTGGATTGTACGATTCCGTGAAACCAGTTGTCCTCACTGGATCATTGCAGGATAGCTTTTTCGCCAGCTTTGCCCTTGGATGGCTCATCACCAATGGTGCAGGTCTTGCATCATACCCAATTGACACTGTGAGAAGAAGAATGATGATGACCTCTGGTGAAGCAGTGAAGTACAAGAATTCCTTGGATGCATTCCAACAAATCATCAAGAATGAGGGTGCCAAGTCCCTGTTCAAGGGTGCTGGTGCCAACATCCTCCGGGCTGTTGCAGGTGCTGGTGTGCTTGCTGGGTATGACAAGTTGCAGGTTCTTGTCTTCGGCAAGAAGTATGGTTCTGGTGGTGCCTAA 1170 0.4709 MVDQVQHPSIMDKVAGQLHLRSGFSSGIKSYDGAFHHPAMYQRPSFGNYSNAALQYPVMSSCKTTMDLSAAATTTSPVFAAAPAEKGHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKTGRLSEPYKGIGDCFKRTMADEGAISLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKKGGERQFKGLVDVYRKTLASDGIAGLYRGFNLSCVGIIVYRGLYFGLYDSVKPVVLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKNSLDAFQQIIKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVLVFGKKYGSGGA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00341 389 ProSiteProfiles Solute carrier (Solcar) repeat profile. 192 284 IPR018108 -
Viun1g00341 389 FunFam ADP,ATP carrier protein, mitochondrial 90 385 - -
Viun1g00341 389 Gene3D Mitochondrial carrier domain 90 385 IPR023395 -
Viun1g00341 389 PRINTS Adenine nucleotide translocator signature 192 205 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun1g00341 389 PRINTS Adenine nucleotide translocator signature 166 178 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun1g00341 389 PRINTS Adenine nucleotide translocator signature 297 313 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun1g00341 389 PRINTS Adenine nucleotide translocator signature 89 101 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun1g00341 389 PRINTS Adenine nucleotide translocator signature 133 154 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun1g00341 389 Pfam Mitochondrial carrier protein 293 380 IPR018108 -
Viun1g00341 389 Pfam Mitochondrial carrier protein 191 286 IPR018108 -
Viun1g00341 389 Pfam Mitochondrial carrier protein 88 184 IPR018108 -
Viun1g00341 389 SUPERFAMILY Mitochondrial carrier 88 374 IPR023395 -
Viun1g00341 389 ProSiteProfiles Solute carrier (Solcar) repeat profile. 87 180 IPR018108 -
Viun1g00341 389 PRINTS Mitochondrial carrier protein signature 301 323 IPR002067 GO:0055085
Viun1g00341 389 PRINTS Mitochondrial carrier protein signature 92 105 IPR002067 GO:0055085
Viun1g00341 389 PRINTS Mitochondrial carrier protein signature 105 119 IPR002067 GO:0055085
Viun1g00341 389 PRINTS Mitochondrial carrier protein signature 257 275 IPR002067 GO:0055085
Viun1g00341 389 PRINTS Mitochondrial carrier protein signature 207 225 IPR002067 GO:0055085
Viun1g00341 389 PRINTS Mitochondrial carrier protein signature 155 175 IPR002067 GO:0055085
Viun1g00341 389 ProSiteProfiles Solute carrier (Solcar) repeat profile. 292 378 IPR018108 -
Viun1g00341 389 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 82 388 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00341 Viun-Chr1 2321401 2324833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00341 1 389 Antiporters AT5G13490 80.916 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00341 K05863 - gmx:100789942 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g00341 1 2321401 2324833 Viun1g00341 1 2321401 2324833 ECH