Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00300 ATGGCATCAAGTTCAATGTCTTCCACTGGGTCATGGAGTGTTAAGGACAACAAGGCCTTTGAAAGGGCTCTAGCTGTTTATGACAAGGACACTCCTGACCGTTGGTACAATGTTGCTAAGGCTGTTGGTGGAGGTAAGACCCCAGAGGAAGTGAAGAGGCACTATGAACTCCTCCTCAGGGATGTTAGGCACATTGAATCAGGTCAAGTGCCCTTCCCAAATTACACTCAAAGTGGAGGCTCTCAAGAGGAGAAAAGGCTCAGAAACTTGAAGCTTCAGTGA 282 0.4752 MASSSMSSTGSWSVKDNKAFERALAVYDKDTPDRWYNVAKAVGGGKTPEEVKRHYELLLRDVRHIESGQVPFPNYTQSGGSQEEKRLRNLKLQ 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00300 93 FunFam Transcription factor SRM1 4 72 - -
Viun1g00300 93 CDD SANT 18 59 IPR001005 -
Viun1g00300 93 ProSiteProfiles Myb-like domain profile. 4 59 IPR001005 -
Viun1g00300 93 ProSiteProfiles SANT domain profile. 7 63 IPR017884 -
Viun1g00300 93 MobiDBLite consensus disorder prediction 69 93 - -
Viun1g00300 93 SUPERFAMILY Homeodomain-like 10 67 IPR009057 -
Viun1g00300 93 Coils Coil 91 93 - -
Viun1g00300 93 Gene3D - 2 72 - -
Viun1g00300 93 SMART sant 8 61 IPR001005 -
Viun1g00300 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 86 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00300 Viun-Chr1 1869891 1871022 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun1g00300 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00300 - - gmx:100804396 176.022