Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00285 ATGCCTCTTTTGCAGATTGAACCAGGTGAAGATATCTGTGTCATTGGGATCTATGGACTTGGAGGCATAGGTAAGACAACAATTGCAAGGGCATTGTACAACATGATTGCAGACCAGTTTGAAGCTACAAGTTTCCTTGCTGACATAAGAGAAAGTTCAAATCAAAGACAAGGGTTGGTGCAGCTTCAAGAATCACTTCTTTTTGACACAGTTGGGGACAAGTACATCAAGCTGGGAAGCATTTACAAAGGGATCCCTATCATCAAGAAAAGGCTTTGTTGCAAAAAAGTACTTTTGATCATTGATGATGTTGACAGTTTGGAACAGCTTCAAGCACTAGCAGGAGGACGCGATTGGTTTGGTTCTGGAAGTGTGGTCATTATAACAACAAGAGATAAGCACTTGTTGAGTGCTCATCAGGTTGACAAAACCTATGAAGTAAAGAAACTAAACCATGGTGAAGCTTTTGAACTGTTCACTTGGAGTGCCTTCAAAAGGAAGGCACCTGATGCAGGCTATTTGGAGGTTTCTAACCGTGTGGTTCTCTATGCTGAGGGGCTTCCATTGGCTTTGAAAGTAATGGGGTCTAATTTGTTTGGTAAAACAGTGAAAGAGTGGAAATCTGCACTGGGAAAATATGAGAAGATTCCCAGCAAAGAGGTTCAGAATGTGTTAAGAGTAACCTATGATAATCTAGAAGAGAATGAGAAGGAAATTTTCCTTGATGTGGCATGCTTCTTCAAGGGAGAGACAGTGGAATATGTAGAAAAGACACTGCAAGCCTGTGGTTTTTATCCAACAATTGGTATCAGTGTACTTATTGATAGATCTCTTGTTAGTATTGATGAATATAACAGATTGAGAATGCATGATCTGATTCAAGACATGGGTAGGGAGATCGTTAGAGAAGTTTCACCATTAGAGCCTGGGAAAAGGAGTAGATTGTGGTATCATGAAGATGTTTTTGAAGTACTCACTGAAAATAAGGGAACTTACAGAATTCAGGGCATGATGGTGGACCTTCCTGATGACTATATGGTACACTTGAAAGATGATTCCTTCAAGAAGATGAAAAATCTTAAAATTCTCATAGTTAGAAATGGAAACTTTTTTGGAAGTCCCCAGCATCTTCCCAACAACTTAAGGTTGCTTGATTGGATGAAATATCCTTCATCTTTGCCATCTAGTTTTCAACCAAAGAAACTTGTTGTACTCAACGTGTCAGGTAGTCGTTTCACAATGCAAGAGCCATTCAAGTATTTGGATTCCTTGACTTCTATGGACTTGAGTTCCTGTGAATTGTTGACAAAACTACCTGATATTTCCGGAGTTCCTAATCTAAGAGAGCTAACTCTTGACGATTGCACAAATTTAGAAGAAGTTCATGAATCTGTTGGATTCCTTGAGAAACTTGTTGAGTTTAGGGCTTATGGATGCACCAAGCTTAAGGTTTTTCCAAGTGGCATCAGGTTGACATCATTGAGAAGTCTTATCCTTAATTGGTGCTCAAGCCTTCAAAATTTCCCTGCTATTTTGGGGAAAATGGATAACCTCATCTCCATTTCTATAGAAGGCACTGGTATAACAGAATTGCCTCCTTCCATTGGAAACCTTGTTGGTCTTCAAGAATTAAGCATGACATCTTGCTTAAGCCTCAAGGAACTGCCTCACAACTTTGATATGCTTCAAAGTCTTACAAACCTTGATATGGATGGCTGTCCACAACTCCGAAACTTTTTGACAAAGTTGGCAAACATGGGAGAATCTACACATACCTTTGGCAACATTCTGTCACTGAATCTACAAAACTGTGGCCTTGTAGATGAAGATCTTCCCATAATTTTCAATAGTTTCCCAAATTTAGCATCAGTAGTACTCTCGGGAAATAATTTTGAAGCTCTTCCAAGCTGCATACAACAATGTCCTTGCTTGGAACTACTTCACTTGGACAACTGTAAAAGACTCCAAGAAATTCCAGCATTTCCTCCTAACATGCAGTACATTAACGCACAAAATTGTACATCATTGTCTGCAGAGTCATCCAATTTATTGTTGGACAAGGAAACTTTTGAACGATGGGAATTACAGGCTATGGTGCCTGGAACAATGGTTCCAGAATGGTTTGACCACATCACCAAAGGAGAATACATGACATTTTGGGTACGTGAAAAGTTTCCGGCTATTATCATATGCTTTGTTCTTGCCGTTGAGAGTGAAATGAAGAAAATTTTCAACTGTGAGATCCGTTTTTATATAAATGGAGAAGAAGTTTATGAATTGGAAATTCGAAGAGGTTTTTCAGATATGGTGACAGATCATTTGTGGCTCTATGACTTGAGAACTCATTCATCAATCAATTGGCGCAGTCTTGATTTATATCTAATGGATGGCTGGAATCAGGTTGAGATTTCATGTGAGAAGATAAGTGGAGCATCAAATGTGACTGTGAGTTGGTGTGGAGTTCATGTGTGTAAGCAAGAAGCTAACATGAAGGATATACTACTCACAGATCCTGATCCAGATTTAGATTCAGTTGTAGCTTCTGTATCAAACACACTAGTTTCTGATCATCCAGCGAAAGCTCAACCACAATCACAAGTCACAAGCTTCATACAGACACCTCAAAAAAATAACAGCTCCACAATTGTGCTGCCAACAACAGTTCAAACCAGCTTGACTGTAAATGATGCAGACATGGAAGCATTTTATGCTGTTCTGGATGATGAGGTCTCTGTGGTGTCACTTGACAATGATTCAACACTGGTTTCGAAATTGGTCAACAAAAGACCAAGTGAAGAGACAAAGAAAGCATTGAGGACACTTCAAGACCATGTCACCAAAGAATTTTATGCTCTGCTGGGCCCTAATGAATACACAACAATGAAAGATACCTTAGAGTACCTCACAAATTTACCAGCAGAAGATGGAATATCAGTGGAAATAAGATCTCTGATAATACAAGTTTCAAGACAGTTCACTCATTGGAGTATGGATTACACATGTGAGAACAAGAAAATAGAGTCTACCACAGCCAAGTTGTTGAAAGCTGAAGAACTAGAAAAGTGTCTTGAAGCTAATAAGACTAACTTCAAGCAAGTGGTGTGCATGGAAAATGAGTTGTGCAATGATTTGGCCTATTTGGAACAGAGAAAGAGAGAGCTAGAAGAGCAAATTAATGCTGTTAAAGCTAACATCTCTGCTTCAGAAGCAGCAAAGAACATGGCTACTCAAAGAAAGAGAGAAATCTTTGGGGAAGCAAAGATTTTGAAAGCTGAAAGAGATGAGTTGAGGGAACAAGTGCCACACTTGAGAGATGAACAGGAATTGGCCAAAAAAATTCAGTCAAATATCAGAGATGAATGGTCAAAGCTTGGTGAAAAATTTAACTATGGATTAAGGCTTGGAAAAATTGATTAG 3417 0.3901 MPLLQIEPGEDICVIGIYGLGGIGKTTIARALYNMIADQFEATSFLADIRESSNQRQGLVQLQESLLFDTVGDKYIKLGSIYKGIPIIKKRLCCKKVLLIIDDVDSLEQLQALAGGRDWFGSGSVVIITTRDKHLLSAHQVDKTYEVKKLNHGEAFELFTWSAFKRKAPDAGYLEVSNRVVLYAEGLPLALKVMGSNLFGKTVKEWKSALGKYEKIPSKEVQNVLRVTYDNLEENEKEIFLDVACFFKGETVEYVEKTLQACGFYPTIGISVLIDRSLVSIDEYNRLRMHDLIQDMGREIVREVSPLEPGKRSRLWYHEDVFEVLTENKGTYRIQGMMVDLPDDYMVHLKDDSFKKMKNLKILIVRNGNFFGSPQHLPNNLRLLDWMKYPSSLPSSFQPKKLVVLNVSGSRFTMQEPFKYLDSLTSMDLSSCELLTKLPDISGVPNLRELTLDDCTNLEEVHESVGFLEKLVEFRAYGCTKLKVFPSGIRLTSLRSLILNWCSSLQNFPAILGKMDNLISISIEGTGITELPPSIGNLVGLQELSMTSCLSLKELPHNFDMLQSLTNLDMDGCPQLRNFLTKLANMGESTHTFGNILSLNLQNCGLVDEDLPIIFNSFPNLASVVLSGNNFEALPSCIQQCPCLELLHLDNCKRLQEIPAFPPNMQYINAQNCTSLSAESSNLLLDKETFERWELQAMVPGTMVPEWFDHITKGEYMTFWVREKFPAIIICFVLAVESEMKKIFNCEIRFYINGEEVYELEIRRGFSDMVTDHLWLYDLRTHSSINWRSLDLYLMDGWNQVEISCEKISGASNVTVSWCGVHVCKQEANMKDILLTDPDPDLDSVVASVSNTLVSDHPAKAQPQSQVTSFIQTPQKNNSSTIVLPTTVQTSLTVNDADMEAFYAVLDDEVSVVSLDNDSTLVSKLVNKRPSEETKKALRTLQDHVTKEFYALLGPNEYTTMKDTLEYLTNLPAEDGISVEIRSLIIQVSRQFTHWSMDYTCENKKIESTTAKLLKAEELEKCLEANKTNFKQVVCMENELCNDLAYLEQRKRELEEQINAVKANISASEAAKNMATQRKREIFGEAKILKAERDELREQVPHLRDEQELAKKIQSNIRDEWSKLGEKFNYGLRLGKID 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00285 1138 Coils Coil 1037 1071 - -
Viun1g00285 1138 Coils Coil 1006 1026 - -
Viun1g00285 1138 Pfam NB-ARC domain 9 226 IPR002182 GO:0043531
Viun1g00285 1138 SUPERFAMILY "Winged helix" DNA-binding domain 220 325 IPR036390 -
Viun1g00285 1138 Gene3D - 149 233 IPR042197 -
Viun1g00285 1138 Gene3D Ribonuclease Inhibitor 504 687 IPR032675 -
Viun1g00285 1138 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 242 IPR027417 -
Viun1g00285 1138 Gene3D - 1 145 IPR027417 -
Viun1g00285 1138 SUPERFAMILY L domain-like 309 680 - -
Viun1g00285 1138 PRINTS Disease resistance protein signature 14 29 - -
Viun1g00285 1138 PRINTS Disease resistance protein signature 91 105 - -
Viun1g00285 1138 PRINTS Disease resistance protein signature 184 198 - -
Viun1g00285 1138 PRINTS Disease resistance protein signature 419 435 - -
Viun1g00285 1138 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 556 IPR044974 GO:0006952
Viun1g00285 1138 Coils Coil 1079 1106 - -
Viun1g00285 1138 Gene3D Ribonuclease Inhibitor 333 503 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00285 Viun-Chr1 1801718 1805940 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00285 11 678 WRKY Transcription Factor Family AT5G45050 32.000 4.59e-87 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00285 - - psat:127127957 1612.05