Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00284 ATGATTGCAGACCAGTTTGAAGCTACAAGTTTCCTTGCTGACATAAGAGAAAGTTCAAATCAAAGACAAGGGTTGGTGCAGCTTCAAGAATCACTTCTTTTTGACACAGTTGGGGACAAGTACATCAAGCTGGGAAGCATTTACAAAGGGATCCCTATCATCAAGAAAAGGCTTTGTTGCAAAAAAGTACTTTTGATCATTGATGATGTTGACAGTTTGGAACAGCTTCAAGCACTAGCAGGAGGACGCGATTGGTTTGGTTCTGGAAGTGTGGTCATTATAACAACAAGAGATAAGCACTTGTTGAGTGCTCATCAGGTTGACAAAACCTATGAAGTAAAGAAACTAAACCATGGTGAAGCTTTTGAACTGTTCACTTGGAGTGCCTTCAAAAGGAAGGCACCTGATGCAGGCTATTTGGAGGTTTCTAACCGTGTGGTTCTCTATGCTGAGGGGCTTCCATTGGCTTTGAAAGTAATGGGGTCTAATTTGTTTGGTAAAACAGTGAAAGAGTGGAAATCTGCACTGGGAAAATATGAGAAGATTCCCAGCAAAGAGGTTCAGAATGTGTTAAGAGTAACCTATGATAATCTAGAAGAGAATGAGAAGGAAATTTTCCTTGATGTGGCATGCTTCTTCAAGGGAGAGACAGTGGAATATGTAGAAAAGACACTGCAAGCCTGTGGTTTTTATCCAACAATTGGTATCAGTGTACTTATTGATAGATCTCTTGTTAGTATTGATGAATATAACAGATTGAGAATGCATGATCTGATTCAAGACATGGGTAGGGAGATCGTTAGAGAAGTTTCACCATTAGAGCCTGGGAAAAGGAGTAGATTGTGGTATCATGAAGATGTTTTTGAAGTACTCACTGAAAATAAGGGAACTTACAGAATTCAGGGCATGATGGTGGACCTTCCTGATGACTATATGGTACACTTGAAAGATGATTCCTTCAAGAAGATGAAAAATCTTAAAATTCTCATAGTTAGAAATGGAAACTTTTTTGGAAGTCCCCAGCATCTTCCCAACAACTTAAGGTTGCTTGATTGGATGAAATATCCTTCATCTTTGCCATCTAGTTTTCAACCAAAGAAACTTGTTGTACTCAACGTGTCAGGTAGTCGTTTCACAATGCAAGAGCCATTCAAGTATTTGGATTCCTTGACTTCTATGGACTTGAGTTCCTGTGAATTGTTGACAAAACTACCTGATATTTCCGGAGTTCCTAATCTAAGAGAGCTAACTCTTGACGATTGCACAAATTTAGAAGAAGTTCATGAATCTGTTGGATTCCTTGAGAAACTTGTTGAGTTTAGGGCTTATGGATGCACCAAGCTTAAGGTTTTTCCAAGTGGCATCAGGTTGACATCATTGAGAAGTCTTATCCTTAATTGGTGCTCAAGCCTTCAAAATTTCCCTGCTATTTTGGGGAAAATGGATAACCTCATCTCCATTTCTATAGAAGGCACTGGTATAACAGAATTGCCTCCTTCCATTGGAAACCTTGTTGGTCTTCAAGAATTAAGCATGACATCTTGCTTAAGCCTCAAGGAACTGCCTCACAACTTTGATATGCTTCAAAGTCTTACAAACCTTGATATGGATGGCTGTCCACAACTCCGAAACTTTTTGACAAAGTTGGCAAACATGGGAGAATCTACACATACCTTTGGCAACATTCTGTCACTGAATCTACAAAACTGTGGCCTTGTAGATGAAGATCTTCCCATAATTTTCAATAGTTTCCCAAATTTAGCATCAGTAGTACTCTCGGGAAATAATTTTGAAGCTCTTCCAAGCTGCATACAACAATGTCCTTGCTTGGAACTACTTCACTTGGACAACTGTAAAAGACTCCAAGAAATTCCAGCATTTCCTCCTAACATGCAGTACATTAACGCACAAAATTGTACATCATTGTCTGCAGAGTCATCCAATTTATTGTTGGACAAGGAAACTTTTGAACGATGGGAATTACAGGCTATGGTGCCTGGAACAATGGTTCCAGAATGGTTTGACCACATCACCAAAGGAGAATACATGACATTTTGGGTACGTGAAAAGTTTCCGGCTATTATCATATGCTTTGTTCTTGCCGTTGAGAGTGAAATGAAGAAAATTTTCAACTGTGAGATCCGTTTTTATATAAATGGAGAAGAAGTTTATGAATTGGAAATTCGAAGAGGTTTTTCAGATATGGTGACAGATCATTTGTGGCTCTATGACTTGAGAACTCATTCATCAATCAATTGGCGCAGTCTTGATTTATATCTAATGGATGGCTGGAATCAGGTTGAGATTTCATGTGAGAAGATAAGTGGAGCATCAAATGTGACTGTGAGTTGGTGTGGAGTTCATGTGTGTAAGCAAGAAGCTAACATGAAGGATATACTACTCACAGATCCTGATCCAGATTTAGATTCAGTTGTAGCTTCTGTATCAAACACACTAGTTTCTGATCATCCAGCGAAAGCTCAACCACAATCACAAGTCACAAGCTTCATACAGACACCTCAAAAAAATAACAGCTCCACAATTGTGCTGCCAACAACAGTTCAAACCAGCTTGACTGTAAATGATGCAGACATGGAAGCATTTTATGCTGTTCTGGATGATGAGGTCTCTGTGGTGTCACTTGACAATGATTCAACACTGGTTTCGAAATTGGTCAACAAAAGACCAAGTGAAGAGACAAAGAAAGCATTGAGGACACTTCAAGACCATGTCACCAAAGAATTTTATGCTCTGCTGGGCCCTAATGAATACACAACAATGAAAGATACCTTAGAGTACCTCACAAATTTACCAGCAGAAGATGGAATATCAGTGGAAATAAGATCTCTGATAATACAAGTTTCAAGACAGTTCACTCATTGGAGTATGGATTACACATGTGAGAACAAGAAAATAGAGTCTACCACAGCCAAGTTGTTGAAAGCTGAAGAACTAGAAAAGTGTCTTGAAGCTAATAAGACTAACTTCAAGCAAGTGGTGTGCATGGAAAATGAGTTGTGCAATGATTTGGCCTATTTGGAACAGAGAAAGAGAGAGCTAGAAGAGCAAATTAATGCTGTTAAAGCTAACATCTCTGCTTCAGAAGCAGCAAAGAACATGGCTACTCAAAGAAAGAGAGAAATCTTTGGGGAAGCAAAGATTTTGAAAGCTGAAAGAGATGAGTTGAGGGAACAAGTGCCACACTTGAGAGATGAACAGGAATTGGCCAAAAAAATTCAGTCAAATATCAGAGATGAATGGTCAAAGCTTGGTGAAAAATTTAACTATGGATTAAGGCTTGGAAAAATTGATTAG 3315 0.3888 MIADQFEATSFLADIRESSNQRQGLVQLQESLLFDTVGDKYIKLGSIYKGIPIIKKRLCCKKVLLIIDDVDSLEQLQALAGGRDWFGSGSVVIITTRDKHLLSAHQVDKTYEVKKLNHGEAFELFTWSAFKRKAPDAGYLEVSNRVVLYAEGLPLALKVMGSNLFGKTVKEWKSALGKYEKIPSKEVQNVLRVTYDNLEENEKEIFLDVACFFKGETVEYVEKTLQACGFYPTIGISVLIDRSLVSIDEYNRLRMHDLIQDMGREIVREVSPLEPGKRSRLWYHEDVFEVLTENKGTYRIQGMMVDLPDDYMVHLKDDSFKKMKNLKILIVRNGNFFGSPQHLPNNLRLLDWMKYPSSLPSSFQPKKLVVLNVSGSRFTMQEPFKYLDSLTSMDLSSCELLTKLPDISGVPNLRELTLDDCTNLEEVHESVGFLEKLVEFRAYGCTKLKVFPSGIRLTSLRSLILNWCSSLQNFPAILGKMDNLISISIEGTGITELPPSIGNLVGLQELSMTSCLSLKELPHNFDMLQSLTNLDMDGCPQLRNFLTKLANMGESTHTFGNILSLNLQNCGLVDEDLPIIFNSFPNLASVVLSGNNFEALPSCIQQCPCLELLHLDNCKRLQEIPAFPPNMQYINAQNCTSLSAESSNLLLDKETFERWELQAMVPGTMVPEWFDHITKGEYMTFWVREKFPAIIICFVLAVESEMKKIFNCEIRFYINGEEVYELEIRRGFSDMVTDHLWLYDLRTHSSINWRSLDLYLMDGWNQVEISCEKISGASNVTVSWCGVHVCKQEANMKDILLTDPDPDLDSVVASVSNTLVSDHPAKAQPQSQVTSFIQTPQKNNSSTIVLPTTVQTSLTVNDADMEAFYAVLDDEVSVVSLDNDSTLVSKLVNKRPSEETKKALRTLQDHVTKEFYALLGPNEYTTMKDTLEYLTNLPAEDGISVEIRSLIIQVSRQFTHWSMDYTCENKKIESTTAKLLKAEELEKCLEANKTNFKQVVCMENELCNDLAYLEQRKRELEEQINAVKANISASEAAKNMATQRKREIFGEAKILKAERDELREQVPHLRDEQELAKKIQSNIRDEWSKLGEKFNYGLRLGKID 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00284 1104 Gene3D - 115 199 IPR042197 -
Viun1g00284 1104 Coils Coil 1045 1072 - -
Viun1g00284 1104 Gene3D Ribonuclease Inhibitor 303 469 IPR032675 -
Viun1g00284 1104 Gene3D Ribonuclease Inhibitor 470 653 IPR032675 -
Viun1g00284 1104 Pfam NB-ARC domain 54 192 IPR002182 GO:0043531
Viun1g00284 1104 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 208 IPR027417 -
Viun1g00284 1104 SUPERFAMILY "Winged helix" DNA-binding domain 186 291 IPR036390 -
Viun1g00284 1104 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 522 IPR044974 GO:0006952
Viun1g00284 1104 PRINTS Disease resistance protein signature 150 164 - -
Viun1g00284 1104 PRINTS Disease resistance protein signature 385 401 - -
Viun1g00284 1104 PRINTS Disease resistance protein signature 57 71 - -
Viun1g00284 1104 Coils Coil 1003 1037 - -
Viun1g00284 1104 Coils Coil 972 992 - -
Viun1g00284 1104 SUPERFAMILY L domain-like 275 646 - -
Viun1g00284 1104 Gene3D - 1 111 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00284 Viun-Chr1 1801718 1806037 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00284 2 644 WRKY Transcription Factor Family AT5G45050 31.259 9.13e-77 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00284 - - psat:127127957 1573.91