Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00283 ATGGCAATTACGTTGGGTGAAGAAGCCTCTTCATCTTCTGGATTTGAACGTGGTTGGACTCACGATGTGTTCTTGAGTTTCAGAGGTGAAGATACAAGGAGAAGCTTTACAGGGTTTCTGTATCATGGTTTGTGCCAAAGGGGTATCGATGTTTTCATTGATGATGAGAAGCTTAGGAGAGGGGAAGATTTATCCCCTGCTCTTCTTGGAGCCATTGAAAAGTCTAGAATTGCCATCATTGTCTTCTCTAAAAACTATGCATTCTCCACATGGTGTCTTGATGAGCTTGCAAAGATCATTGACTGTTACAAAACAAGAGGGCTACTTGTGTGGCCAGTTTTCTTCCATGTCGACCCTTCTGCGGTGCGCCATCAGAGAGGAACTTTTCAAACAGCAATGGCCGAACATGAAATCAGATTCAAGGGTAATGTTGAAAAGTTGCAGAGGTGGAAGAAAGCCTTGTTTGAAGCATCCAATTTCTCAGGTTGGGCCTTCGAAAATGGGTATGAATTTCAGATTATCCAAGATATAATTGAGGAGGCCTCTAGAAAGTTAAGCCACACCATTTTGCACATTGCTGAATACCCAGTTGGAATAGAAACTCGCATATCAGAAGTGATGCCTCTTTTGCAGATTGAACCAGGTGAAGATATCTGTGTCATTGGGATCTATGGACTTGGAGGCATAGGTAAGACAACAATTGCAAGGGCATTGTACAACATGATTGCAGACCAGTTTGAAGCTACAAGTTTCCTTGCTGACATAAGAGAAAGTTCAAATCAAAGACAAGGGTTGGTGCAGCTTCAAGAATCACTTCTTTTTGACACAGTTGGGGACAAGTACATCAAGCTGGGAAGCATTTACAAAGGGATCCCTATCATCAAGAAAAGGCTTTGTTGCAAAAAAGTACTTTTGATCATTGATGATGTTGACAGTTTGGAACAGCTTCAAGCACTAGCAGGAGGACGCGATTGGTTTGGTTCTGGAAGTGTGGTCATTATAACAACAAGAGATAAGCACTTGTTGAGTGCTCATCAGGTTGACAAAACCTATGAAGTAAAGAAACTAAACCATGGTGAAGCTTTTGAACTGTTCACTTGGAGTGCCTTCAAAAGGAAGGCACCTGATGCAGGCTATTTGGAGGTTTCTAACCGTGTGGTTCTCTATGCTGAGGGGCTTCCATTGGCTTTGAAAGTAATGGGGTCTAATTTGTTTGGTAAAACAGTGAAAGAGTGGAAATCTGCACTGGGAAAATATGAGAAGATTCCCAGCAAAGAGGTTCAGAATGTGTTAAGAGTAACCTATGATAATCTAGAAGAGAATGAGAAGGAAATTTTCCTTGATGTGGCATGCTTCTTCAAGGGAGAGACAGTGGAATATGTAGAAAAGACACTGCAAGCCTGTGGTTTTTATCCAACAATTGGTATCAGTGTACTTATTGATAGATCTCTTGTTAGTATTGATGAATATAACAGATTGAGAATGCATGATCTGATTCAAGACATGGGTAGGGAGATCGTTAGAGAAGTTTCACCATTAGAGCCTGGGAAAAGGAGTAGATTGTGGTATCATGAAGATGTTTTTGAAGTACTCACTGAAAATAAGGGAACTTACAGAATTCAGGGCATGATGGTGGACCTTCCTGATGACTATATGGTACACTTGAAAGATGATTCCTTCAAGAAGATGAAAAATCTTAAAATTCTCATAGTTAGAAATGGAAACTTTTTTGGAAGTCCCCAGCATCTTCCCAACAACTTAAGGTTGCTTGATTGGATGAAATATCCTTCATCTTTGCCATCTAGTTTTCAACCAAAGAAACTTGTTGTACTCAACGTGTCAGGTAGTCGTTTCACAATGCAAGAGCCATTCAAGTATTTGGATTCCTTGACTTCTATGGACTTGAGTTCCTGTGAATTGTTGACAAAACTACCTGATATTTCCGGAGTTCCTAATCTAAGAGAGCTAACTCTTGACGATTGCACAAATTTAGAAGAAGTTCATGAATCTGTTGGATTCCTTGAGAAACTTGTTGAGTTTAGGGCTTATGGATGCACCAAGCTTAAGGTTTTTCCAAGTGGCATCAGGTTGACATCATTGAGAAGTCTTATCCTTAATTGGTGCTCAAGCCTTCAAAATTTCCCTGCTATTTTGGGGAAAATGGATAACCTCATCTCCATTTCTATAGAAGGCACTGGTATAACAGAATTGCCTCCTTCCATTGGAAACCTTGTTGGTCTTCAAGAATTAAGCATGACATCTTGCTTAAGCCTCAAGGAACTGCCTCACAACTTTGATATGCTTCAAAGTCTTACAAACCTTGATATGGATGGCTGTCCACAACTCCGAAACTTTTTGACAAAGTTGGCAAACATGGGAGAATCTACACATACCTTTGGCAACATTCTGTCACTGAATCTACAAAACTGTGGCCTTGTAGATGAAGATCTTCCCATAATTTTCAATAGTTTCCCAAATTTAGCATCAGTAGTACTCTCGGGAAATAATTTTGAAGCTCTTCCAAGCTGCATACAACAATGTCCTTGCTTGGAACTACTTCACTTGGACAACTGTAAAAGACTCCAAGAAATTCCAGCATTTCCTCCTAACATGCAGTACATTAACGCACAAAATTGTACATCATTGTCTGCAGAGTCATCCAATTTATTGTTGGACAAGGAAACTTTTGAACGATGGGAATTACAGGCTATGGTGCCTGGAACAATGGTTCCAGAATGGTTTGACCACATCACCAAAGGAGAATACATGACATTTTGGGTACGTGAAAAGTTTCCGGCTATTATCATATGCTTTGTTCTTGCCGTTGAGAGTGAAATGAAGAAAATTTTCAACTGTGAGATCCGTTTTTATATAAATGGAGAAGAAGTTTATGAATTGGAAATTCGAAGAGGTTTTTCAGATATGGTGACAGATCATTTGTGGCTCTATGACTTGAGAACTCATTCATCAATCAATTGGCGCAGTCTTGATTTATATCTAATGGATGGCTGGAATCAGGTTGAGATTTCATGTGAGAAGATAAGTGGAGCATCAAATGTGACTGTGAGTTGGTGTGGAGTTCATGTGTGTAAGCAAGAAGCTAACATGAAGGATATACTACTCACAGATCCTGATCCAGATTTAGATTCAGTTGTAGCTTCTGTATCAAACACACTAGTTTCTGATCATCCAGCGAAAGCTCAACCACAATCACAAGTCACAAGCTTCATACAGACACCTCAAAAAAATAACAGCTCCACAATTGTGCTGCCAACAACAGTTCAAACCAGCTTGACTGTAAATGATGCAGACATGGAAGCATTTTATGCTGTTCTGGATGATGAGGTCTCTGTGGTGTCACTTGACAATGATTCAACACTGGTTTCGAAATTGGTCAACAAAAGACCAAGTGAAGAGACAAAGAAAGCATTGAGGACACTTCAAGACCATGTCACCAAAGAATTTTATGCTCTGCTGGGCCCTAATGAATACACAACAATGAAAGATACCTTAGAGTACCTCACAAATTTACCAGCAGAAGATGGAATATCAGTGGAAATAAGATCTCTGATAATACAAGTTTCAAGACAGTTCACTCATTGGAGTATGGATTACACATGTGAGAACAAGAAAATAGAGTCTACCACAGCCAAGTTGTTGAAAGCTGAAGAACTAGAAAAGTGTCTTGAAGCTAATAAGACTAACTTCAAGCAAGTGGTGTGCATGGAAAATGAGTTGTGCAATGATTTGGCCTATTTGGAACAGAGAAAGAGAGAGCTAGAAGAGCAAATTAATGCTGTTAAAGCTAACATCTCTGCTTCAGAAGCAGCAAAGAACATGGCTACTCAAAGAAAGAGAGAAATCTTTGGGGAAGCAAAGATTTTGAAAGCTGAAAGAGATGAGTTGAGGGAACAAGTGCCACACTTGAGAGATGAACAGGAATTGGCCAAAAAAATTCAGTCAAATATCAGAGATGAATGGTCAAAGCTTGGTGAAAAATTTAACTATGGATTAAGGCTTGGAAAAATTGATTAG 4035 0.3955 MAITLGEEASSSSGFERGWTHDVFLSFRGEDTRRSFTGFLYHGLCQRGIDVFIDDEKLRRGEDLSPALLGAIEKSRIAIIVFSKNYAFSTWCLDELAKIIDCYKTRGLLVWPVFFHVDPSAVRHQRGTFQTAMAEHEIRFKGNVEKLQRWKKALFEASNFSGWAFENGYEFQIIQDIIEEASRKLSHTILHIAEYPVGIETRISEVMPLLQIEPGEDICVIGIYGLGGIGKTTIARALYNMIADQFEATSFLADIRESSNQRQGLVQLQESLLFDTVGDKYIKLGSIYKGIPIIKKRLCCKKVLLIIDDVDSLEQLQALAGGRDWFGSGSVVIITTRDKHLLSAHQVDKTYEVKKLNHGEAFELFTWSAFKRKAPDAGYLEVSNRVVLYAEGLPLALKVMGSNLFGKTVKEWKSALGKYEKIPSKEVQNVLRVTYDNLEENEKEIFLDVACFFKGETVEYVEKTLQACGFYPTIGISVLIDRSLVSIDEYNRLRMHDLIQDMGREIVREVSPLEPGKRSRLWYHEDVFEVLTENKGTYRIQGMMVDLPDDYMVHLKDDSFKKMKNLKILIVRNGNFFGSPQHLPNNLRLLDWMKYPSSLPSSFQPKKLVVLNVSGSRFTMQEPFKYLDSLTSMDLSSCELLTKLPDISGVPNLRELTLDDCTNLEEVHESVGFLEKLVEFRAYGCTKLKVFPSGIRLTSLRSLILNWCSSLQNFPAILGKMDNLISISIEGTGITELPPSIGNLVGLQELSMTSCLSLKELPHNFDMLQSLTNLDMDGCPQLRNFLTKLANMGESTHTFGNILSLNLQNCGLVDEDLPIIFNSFPNLASVVLSGNNFEALPSCIQQCPCLELLHLDNCKRLQEIPAFPPNMQYINAQNCTSLSAESSNLLLDKETFERWELQAMVPGTMVPEWFDHITKGEYMTFWVREKFPAIIICFVLAVESEMKKIFNCEIRFYINGEEVYELEIRRGFSDMVTDHLWLYDLRTHSSINWRSLDLYLMDGWNQVEISCEKISGASNVTVSWCGVHVCKQEANMKDILLTDPDPDLDSVVASVSNTLVSDHPAKAQPQSQVTSFIQTPQKNNSSTIVLPTTVQTSLTVNDADMEAFYAVLDDEVSVVSLDNDSTLVSKLVNKRPSEETKKALRTLQDHVTKEFYALLGPNEYTTMKDTLEYLTNLPAEDGISVEIRSLIIQVSRQFTHWSMDYTCENKKIESTTAKLLKAEELEKCLEANKTNFKQVVCMENELCNDLAYLEQRKRELEEQINAVKANISASEAAKNMATQRKREIFGEAKILKAERDELREQVPHLRDEQELAKKIQSNIRDEWSKLGEKFNYGLRLGKID 1344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00283 1344 SUPERFAMILY L domain-like 515 886 - -
Viun1g00283 1344 Gene3D - 15 189 IPR035897 -
Viun1g00283 1344 SUPERFAMILY "Winged helix" DNA-binding domain 426 531 IPR036390 -
Viun1g00283 1344 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 187 - -
Viun1g00283 1344 Gene3D - 190 353 IPR027417 -
Viun1g00283 1344 Coils Coil 1285 1312 - -
Viun1g00283 1344 Pfam NB-ARC domain 200 432 IPR002182 GO:0043531
Viun1g00283 1344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 448 IPR027417 -
Viun1g00283 1344 SMART till_3 20 160 IPR000157 GO:0007165
Viun1g00283 1344 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 163 IPR035897 -
Viun1g00283 1344 ProSiteProfiles TIR domain profile. 19 185 IPR000157 GO:0007165
Viun1g00283 1344 Coils Coil 1243 1277 - -
Viun1g00283 1344 Gene3D Ribonuclease Inhibitor 713 896 IPR032675 -
Viun1g00283 1344 Coils Coil 1212 1232 - -
Viun1g00283 1344 Gene3D - 355 439 IPR042197 -
Viun1g00283 1344 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 762 IPR044974 GO:0006952
Viun1g00283 1344 Gene3D Ribonuclease Inhibitor 543 712 IPR032675 -
Viun1g00283 1344 PRINTS Disease resistance protein signature 390 404 - -
Viun1g00283 1344 PRINTS Disease resistance protein signature 220 235 - -
Viun1g00283 1344 PRINTS Disease resistance protein signature 297 311 - -
Viun1g00283 1344 PRINTS Disease resistance protein signature 625 641 - -
Viun1g00283 1344 Pfam TIR domain 21 163 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00283 Viun-Chr1 1801718 1806449 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00283 15 785 WRKY Transcription Factor Family AT4G12020 30.788 2.26e-89 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00283 - - psat:127127957 1887.85