Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00282 ATGGTTTGTGCCAAAGGGGTATCGATGTTTTCATTGATGATGAGAAGCTTAGGAGAGGGGAAGATTTATCCCCTGCTCTTCTTGGAGCCATTGAAAAGTCTAGAATTGCCATCATTGTCTTCTCTAAAAACTATGCATTCTCCACATGGTGTCTTGATGAGCTTGCAAAGATCATTGACTGTTACAAAACAAGAGGGCTACTTGTGTGGCCAGTTTTCTTCCATGTCGACCCTTCTGCGGTGCGCCATCAGAGAGGAACTTTTCAAACAGCAATGGCCGAACATGAAATCAGATTCAAGGGTAATGTTGAAAAGTTGCAGAGGTGGAAGAAAGCCTTGTTTGAAGCATCCAATTTCTCAGATTATCCAAGATATAATTGAGGAGGCCTCTAGAAAGTTAAGCCACACCATTTTGCACATTGCTGAATACCCAGTTGGAATAGAAACTCGCATATCAGAAGTGATGCCTCTTTTGCAGATTGAACCAGGTGAAGATATCTGTGTCATTGGGATCTATGGACTTGGAGGCATAGGTAAGACAACAATTGCAAGGGCATTGTACAACATGATTGCAGACCAGTTTGAAGCTACAAGTTTCCTTGCTGACATAAGAGAAAGTTCAAATCAAAGACAAGGGTTGGTGCAGCTTCAAGAATCACTTCTTTTTGACACAGTTGGGGACAAGTACATCAAGCTGGGAAGCATTTACAAAGGGATCCCTATCATCAAGAAAAGGCTTTGTTGCAAAAAAGTACTTTTGATCATTGATGATGTTGACAGTTTGGAACAGCTTCAAGCACTAGCAGGAGGACGCGATTGGTTTGGTTCTGGAAGTGTGGTCATTATAACAACAAGAGATAAGCACTTGTTGAGTGCTCATCAGGTTGACAAAACCTATGAAGTAAAGAAACTAAACCATGGTGAAGCTTTTGAACTGTTCACTTGGAGTGCCTTCAAAAGGAAGGCACCTGATGCAGGCTATTTGGAGGTTTCTAACCGTGTGGTTCTCTATGCTGAGGGGCTTCCATTGGCTTTGAAAGTAATGGGGTCTAATTTGTTTGGTAAAACAGTGAAAGAGTGGAAATCTGCACTGGGAAAATATGAGAAGATTCCCAGCAAAGAGGTTCAGAATGTGTTAAGAGTAACCTATGATAATCTAGAAGAGAATGAGAAGGAAATTTTCCTTGATGTGGCATGCTTCTTCAAGGGAGAGACAGTGGAATATGTAGAAAAGACACTGCAAGCCTGTGGTTTTTATCCAACAATTGGTATCAGTGTACTTATTGATAGATCTCTTGTTAGTATTGATGAATATAACAGATTGAGAATGCATGATCTGATTCAAGACATGGGTAGGGAGATCGTTAGAGAAGTTTCACCATTAGAGCCTGGGAAAAGGAGTAGATTGTGGTATCATGAAGATGTTTTTGAAGTACTCACTGAAAATAAGGGAACTTACAGAATTCAGGGCATGATGGTGGACCTTCCTGATGACTATATGGTACACTTGAAAGATGATTCCTTCAAGAAGATGAAAAATCTTAAAATTCTCATAGTTAGAAATGGAAACTTTTTTGGAAGTCCCCAGCATCTTCCCAACAACTTAAGGTTGCTTGATTGGATGAAATATCCTTCATCTTTGCCATCTAGTTTTCAACCAAAGAAACTTGTTGTACTCAACGTGTCAGGTAGTCGTTTCACAATGCAAGAGCCATTCAAGTATTTGGATTCCTTGACTTCTATGGACTTGAGTTCCTGTGAATTGTTGACAAAACTACCTGATATTTCCGGAGTTCCTAATCTAAGAGAGCTAACTCTTGACGATTGCACAAATTTAGAAGAAGTTCATGAATCTGTTGGATTCCTTGAGAAACTTGTTGAGTTTAGGGCTTATGGATGCACCAAGCTTAAGGTTTTTCCAAGTGGCATCAGGTTGACATCATTGAGAAGTCTTATCCTTAATTGGTGCTCAAGCCTTCAAAATTTCCCTGCTATTTTGGGGAAAATGGATAACCTCATCTCCATTTCTATAGAAGGCACTGGTATAACAGAATTGCCTCCTTCCATTGGAAACCTTGTTGGTCTTCAAGAATTAAGCATGACATCTTGCTTAAGCCTCAAGGAACTGCCTCACAACTTTGATATGCTTCAAAGTCTTACAAACCTTGATATGGATGGCTGTCCACAACTCCGAAACTTTTTGACAAAGTTGGCAAACATGGGAGAATCTACACATACCTTTGGCAACATTCTGTCACTGAATCTACAAAACTGTGGCCTTGTAGATGAAGATCTTCCCATAATTTTCAATAGTTTCCCAAATTTAGCATCAGTAGTACTCTCGGGAAATAATTTTGAAGCTCTTCCAAGCTGCATACAACAATGTCCTTGCTTGGAACTACTTCACTTGGACAACTGTAAAAGACTCCAAGAAATTCCAGCATTTCCTCCTAACATGCAGTACATTAACGCACAAAATTGTACATCATTGTCTGCAGAGTCATCCAATTTATTGTTGGACAAGGAAACTTTTGAACGATGGGAATTACAGGCTATGGTGCCTGGAACAATGGTTCCAGAATGGTTTGACCACATCACCAAAGGAGAATACATGACATTTTGGGTACGTGAAAAGTTTCCGGCTATTATCATATGCTTTGTTCTTGCCGTTGAGAGTGAAATGAAGAAAATTTTCAACTGTGAGATCCGTTTTTATATAAATGGAGAAGAAGTTTATGAATTGGAAATTCGAAGAGGTTTTTCAGATATGGTGACAGATCATTTGTGGCTCTATGACTTGAGAACTCATTCATCAATCAATTGGCGCAGTCTTGATTTATATCTAATGGATGGCTGGAATCAGGTTGAGATTTCATGTGAGAAGATAAGTGGAGCATCAAATGTGACTGTGAGTTGGTGTGGAGTTCATGTGTGTAAGCAAGAAGCTAACATGAAGGATATACTACTCACAGATCCTGATCCAGATTTAGATTCAGTTGTAGCTTCTGTATCAAACACACTAGTTTCTGATCATCCAGCGAAAGCTCAACCACAATCACAAGTCACAAGCTTCATACAGACACCTCAAAAAAATAACAGCTCCACAATTGTGCTGCCAACAACAGTTCAAACCAGCTTGACTGTAAATGATGCAGACATGGAAGCATTTTATGCTGTTCTGGATGATGAGGTCTCTGTGGTGTCACTTGACAATGATTCAACACTGGTTTCGAAATTGGTCAACAAAAGACCAAGTGAAGAGACAAAGAAAGCATTGAGGACACTTCAAGACCATGTCACCAAAGAATTTTATGCTCTGCTGGGCCCTAATGAATACACAACAATGAAAGATACCTTAGAGTACCTCACAAATTTACCAGCAGAAGATGGAATATCAGTGGAAATAAGATCTCTGATAATACAAGTTTCAAGACAGTTCACTCATTGGAGTATGGATTACACATGTGAGAACAAGAAAATAGAGTCTACCACAGCCAAGTTGTTGAAAGCTGAAGAACTAGAAAAGTGTCTTGAAGCTAATAAGACTAACTTCAAGCAAGTGGTGTGCATGGAAAATGAGTTGTGCAATGATTTGGCCTATTTGGAACAGAGAAAGAGAGAGCTAGAAGAGCAAATTAATGCTGTTAAAGCTAACATCTCTGCTTCAGAAGCAGCAAAGAACATGGCTACTCAAAGAAAGAGAGAAATCTTTGGGGAAGCAAAGATTTTGAAAGCTGAAAGAGATGAGTTGAGGGAACAAGTGCCACACTTGAGAGATGAACAGGAATTGGCCAAAAAAATTCAGTCAAATATCAGAGATGAATGGTCAAAGCTTGGTGAAAAATTTAACTATGGATTAAGGCTTGGAAAAATTGATTAG 3879 0.3939 MVCAKGVSMFSLMMRSLGEGKIYPLLFLEPLKSLELPSLSSLKTMHSPHGVLMSLQRSLTVTKQEGYLCGQFSSMSTLLRCAIREELFKQQWPNMKSDSRVMLKSCRGGRKPCLKHPISQIIQDIIEEASRKLSHTILHIAEYPVGIETRISEVMPLLQIEPGEDICVIGIYGLGGIGKTTIARALYNMIADQFEATSFLADIRESSNQRQGLVQLQESLLFDTVGDKYIKLGSIYKGIPIIKKRLCCKKVLLIIDDVDSLEQLQALAGGRDWFGSGSVVIITTRDKHLLSAHQVDKTYEVKKLNHGEAFELFTWSAFKRKAPDAGYLEVSNRVVLYAEGLPLALKVMGSNLFGKTVKEWKSALGKYEKIPSKEVQNVLRVTYDNLEENEKEIFLDVACFFKGETVEYVEKTLQACGFYPTIGISVLIDRSLVSIDEYNRLRMHDLIQDMGREIVREVSPLEPGKRSRLWYHEDVFEVLTENKGTYRIQGMMVDLPDDYMVHLKDDSFKKMKNLKILIVRNGNFFGSPQHLPNNLRLLDWMKYPSSLPSSFQPKKLVVLNVSGSRFTMQEPFKYLDSLTSMDLSSCELLTKLPDISGVPNLRELTLDDCTNLEEVHESVGFLEKLVEFRAYGCTKLKVFPSGIRLTSLRSLILNWCSSLQNFPAILGKMDNLISISIEGTGITELPPSIGNLVGLQELSMTSCLSLKELPHNFDMLQSLTNLDMDGCPQLRNFLTKLANMGESTHTFGNILSLNLQNCGLVDEDLPIIFNSFPNLASVVLSGNNFEALPSCIQQCPCLELLHLDNCKRLQEIPAFPPNMQYINAQNCTSLSAESSNLLLDKETFERWELQAMVPGTMVPEWFDHITKGEYMTFWVREKFPAIIICFVLAVESEMKKIFNCEIRFYINGEEVYELEIRRGFSDMVTDHLWLYDLRTHSSINWRSLDLYLMDGWNQVEISCEKISGASNVTVSWCGVHVCKQEANMKDILLTDPDPDLDSVVASVSNTLVSDHPAKAQPQSQVTSFIQTPQKNNSSTIVLPTTVQTSLTVNDADMEAFYAVLDDEVSVVSLDNDSTLVSKLVNKRPSEETKKALRTLQDHVTKEFYALLGPNEYTTMKDTLEYLTNLPAEDGISVEIRSLIIQVSRQFTHWSMDYTCENKKIESTTAKLLKAEELEKCLEANKTNFKQVVCMENELCNDLAYLEQRKRELEEQINAVKANISASEAAKNMATQRKREIFGEAKILKAERDELREQVPHLRDEQELAKKIQSNIRDEWSKLGEKFNYGLRLGKID 1292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00282 1292 Gene3D - 303 387 IPR042197 -
Viun1g00282 1292 Gene3D Ribonuclease Inhibitor 657 840 IPR032675 -
Viun1g00282 1292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 396 IPR027417 -
Viun1g00282 1292 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 99 710 IPR044974 GO:0006952
Viun1g00282 1292 SUPERFAMILY "Winged helix" DNA-binding domain 374 479 IPR036390 -
Viun1g00282 1292 Gene3D Ribonuclease Inhibitor 489 656 IPR032675 -
Viun1g00282 1292 Coils Coil 1233 1260 - -
Viun1g00282 1292 Pfam NB-ARC domain 148 380 IPR002182 GO:0043531
Viun1g00282 1292 Gene3D - 129 299 IPR027417 -
Viun1g00282 1292 SUPERFAMILY L domain-like 463 834 - -
Viun1g00282 1292 Coils Coil 1191 1225 - -
Viun1g00282 1292 Coils Coil 1160 1180 - -
Viun1g00282 1292 PRINTS Disease resistance protein signature 168 183 - -
Viun1g00282 1292 PRINTS Disease resistance protein signature 245 259 - -
Viun1g00282 1292 PRINTS Disease resistance protein signature 573 589 - -
Viun1g00282 1292 PRINTS Disease resistance protein signature 338 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00282 Viun-Chr1 1801718 1806450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00282 145 832 WRKY Transcription Factor Family AT5G45050 31.667 5.98e-88 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00282 - - psat:127127957 1657.88