Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00280 ATGGAATCGCCGCAGCCAGGTTCAAGAGGAGCAGAAGCTCTTAAAGATGTAGCCCCTGGTTCATCTATTTCTGTTAAATATCACCCACTTTTTGGACCTCATGATGACCTCCTCCTTCTAGAGCTTGATGAGAAACTTCTCCCAGATGTGCTGCATGAAAGGGTGGTCTTGAGAGGACAGCCTGATGAGGATGCAGTTCTTTGTACTCAATCCAGAACATATGCTATGAAGTTTGTTGGAACTTCCAATTCGGTTCTGCTTATACCACCAGCGAATCATTCAGAATTTTGTGAAAATCCACAAAAGAATGATAGTAATAAGGAAGAAGAGAAAGTTGTTGCACCTGTAATCAAAGTTGTATCTGGTAATATGGAGCTTGTCGAGGCAGCTCCCAGACTTGATAAACTTAAGTCTTTTCTTTTAGAAAAGACTTACAATTTTGAGGAATATGATGATGGAAATTTAGAAGACAACGTGGAATCTACAATAGGATTATATAGCTGGAATGATCTTGTTGACAATATCCAAGCTAGTGATGAGGAGTTAAGGTCTGGACTGCAGGCTCTTTCTGCAGTGGAGATTAATGGATATTGGAGATTAGTAGATGGGAGTTACATGGACATGATTCTTGGAATGCTTTTGAAAAATTCGGTGTTAAATGATTGGTCACTTAATGCTTTAAACGAAGATGAAGTTGTTAGTACGCTGGTATCAGATGGATTTCCTGGGGTGCTGGCAAGGCATTGTTTGCATACATATGGCACCAAAGTAAATGAAGACATGCCTGACTGTGTCTGGAAGTTGGATGAGAAGCGAGTGTGCATACATTTTGCAAGAGAAATCCTGAAAAGTGGTAAAAGGAAGTTAGAAAGTTTCATGGATGAGTGGCGGAAGAAGGTTCCAGATGGAATGCAGCCCACTTTTGATCTTGTGGAAGGAGAGGTATTAATAGAGAGAATTGGAGTTGAGACATGGATTCGCGCCTTCAGCGTGGCATCTCTGCCTTCCAATCCAGCTGAGCGTTTCGCCATTCTTTTCAGAGAGAGGACAAAATGGGAATGGAAAGATCTGCAGCCATATGTCAGAGATCTGAAGGTACCAGGTCTTTCTTCAGAAGGTTTGCTACTCAAATACACTCGAAGGACACAACCATCACCTGATGCGGAACCAGTTTTCAGCGCAAGATAG 1188 0.4192 MESPQPGSRGAEALKDVAPGSSISVKYHPLFGPHDDLLLLELDEKLLPDVLHERVVLRGQPDEDAVLCTQSRTYAMKFVGTSNSVLLIPPANHSEFCENPQKNDSNKEEEKVVAPVIKVVSGNMELVEAAPRLDKLKSFLLEKTYNFEEYDDGNLEDNVESTIGLYSWNDLVDNIQASDEELRSGLQALSAVEINGYWRLVDGSYMDMILGMLLKNSVLNDWSLNALNEDEVVSTLVSDGFPGVLARHCLHTYGTKVNEDMPDCVWKLDEKRVCIHFAREILKSGKRKLESFMDEWRKKVPDGMQPTFDLVEGEVLIERIGVETWIRAFSVASLPSNPAERFAILFRERTKWEWKDLQPYVRDLKVPGLSSEGLLLKYTRRTQPSPDAEPVFSAR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00280 395 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 12 395 IPR019128 GO:0007064|GO:0031390
Viun1g00280 395 Pfam Sister chromatid cohesion protein Dcc1 38 361 IPR019128 GO:0007064|GO:0031390
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00280 10 395 C3H Transcription Factor Family AT2G44580 57.653 1.02e-163 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00280 K11271 - gmx:100817511 667.922