Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00276 ATGGTGACGAAAAGGCTTAGATGTTGTGCAAACTTCCTCGAGAACTCCAAACACCACTTTGCCATGATCGCTCTGCAATTTGGCTATGCAGGCATGAACATCATCACTAAGGTTTCCCTCAACCGTGGAATGAGCCACTATGTTCTTGTCGTTTATCGCCATGCCTTTGCCACTGCTGTCATAGCTCCATTTGCCTTCATCTTTGAAAGGAAAGCTCAACCAAGGATCACTTTCAAAATTTTCATGCAAATTTTCATCCTTGCTCTACTTGGGCCTGTGATTGATCAAAACTTCTACTATGCTGGGTTGAAATTAACATCTCCAACTTTCTCTTGTGCAATGAGCAATGTGCTTCCTGCTATGACTTTTGTAATGGCAGTTTTATGCAGGATGGAGAAGTTGAACATGAAGAAGGTGAGGTGCCAAGCAAAGGTGGTGGGAACATTGGTGACTGTGGGTGGAGCCATGGTGATGACCTTGTACAAAGGACCTCTGGTGGAAATGGTTTGGAACAAACATGCCCACAACAACCAAACAACTAATGCAACAACAACCAATAATAATGTTGCAACACCTTCAGACAAAGATTGGCTCATAGGTTCCATTCTCCTCATCATTGCCACACTTGCTTGGGCTTCCCTCTTTGTTTTACAAGCGAAAGCTATTGAAACCTACAAAAATCACCAGCTAAGCCTCACATCACTGATATGCTTCTTAGGCACTATTCAAGCTATTGCTGTTACTTTTGTTATGGAACACGATCCATCGGTTTGGACTATTGGCTGGGATATGAACTTGCTTGCTGCTGCATATGCTGGGATTGTTTCATCAAGCCTATCATACTATGTTCAAGGGTTGGTGATTAAGACGAAAGGGCCTGTTTTTGCAACTGCATTTAGTCCTCTCATGATGATCATTGTAGCAATCATGGGTTCCTTTATCCTTGCAGAACAAATTTTTCTTGGAGGTGTTGTTGGTGCGATCTTGATCGTAATAGGGTTATACTCGGTTCTTTGGGGAAAGCACAAAGAAGAAGTGGAGAATAATAATAATAATAAAGTGGTGGAGAATATTCCCTTGCCTTTGAAGGGTGCAATGGTTGAAGCAAATAATAATCCAGATTCTTCCAACAACATTTCTTCACTTATCATTAATGTCACCACTGAACCTCCATTCAAATCTAACAGTTAA 1191 0.4148 MVTKRLRCCANFLENSKHHFAMIALQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFIFERKAQPRITFKIFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNVLPAMTFVMAVLCRMEKLNMKKVRCQAKVVGTLVTVGGAMVMTLYKGPLVEMVWNKHAHNNQTTNATTTNNNVATPSDKDWLIGSILLIIATLAWASLFVLQAKAIETYKNHQLSLTSLICFLGTIQAIAVTFVMEHDPSVWTIGWDMNLLAAAYAGIVSSSLSYYVQGLVIKTKGPVFATAFSPLMMIIVAIMGSFILAEQIFLGGVVGAILIVIGLYSVLWGKHKEEVENNNNNKVVENIPLPLKGAMVEANNNPDSSNNISSLIINVTTEPPFKSNS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00276 396 PANTHER WAT1-RELATED PROTEIN 20 350 IPR030184 GO:0016020|GO:0022857
Viun1g00276 396 Pfam EamA-like transporter family 21 158 IPR000620 GO:0016020
Viun1g00276 396 Pfam EamA-like transporter family 199 338 IPR000620 GO:0016020
Viun1g00276 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 258 343 - -
Viun1g00276 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00276 Viun-Chr1 1712520 1715728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00276 1 386 Nodulin-like Gene Family AT5G07050 66.834 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00276 - - gmx:100799947 596.275