Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00275 ATGTATGGACCTATTGTTAAACTGTGGTTAGGTCCTACTCAACTTTTGGTGTCAGTAAGGGATCCAATGTTAATACAAGACATGCTTATAAAAGCTGAGGATAAGTTGCCTTACACAGGAAAATTGTTTCATCTGGCCTTTGGGCAATCAAGCCTCTTTGCCCCTTCATTTGAAAAGGTGCAAAAGAGAAGGGAACTATTGGCAACAGAATTAAACGAAAGATTGCTGAAGAATGGTGATATGATTCCTGTGAAAGTTGCAGACTTTATCACAGATAAAATAGAAACCATAGAAAAGAAAGGAGGTCTTGATTCCAGGTTGGTTTCTCAGCACATCGCTTTCACTATAATGGGAGTCACATTCTTTGGAGATGGCTTCTTGGCCTCACCGAAGGCTGCAATGTATGAGGAACTGTTCATGACCATTGCTAAAGATGCTTGCTTTTGGGCCTCCTATAATGTTACTCCTTTCTGGAGACGTGGATTTTGGAAGTACCAATGCTTATGTACAAAGTTGAAATGCTTAACTCAAGACATCCTTCAACATTGTAGAAAAGGTTGTAAACTATCTAGCCATACTGGGCAAGATGTACATTATGAAAGTTCCACTGAAGAAATGAAGTCAGCAGATGGTGCACAATGCTGTTCTGATGATGAGTTCCAAGATTACTATTTCTTTCGAGATCTTAAGGATCATCAAGATGGTAAAGAAGAGCCTTGTGGGAATGTCATGCGCATGATATTTCACGGATGTCAAACTACCTCTGTTCTAATCACGGATGTATTGACTAGGCTTGTCATGCATGGGGAAATACAGGATAAGGTTTATTCGGAGATTAGCATGGTAAGAAGAAACCCATCGAAATTTGAGCATGAAGATGTTTATAGGATGCCGTTGTTATTGGCTACAATTTATGAATCTGCACGCCTTCTTCCCACTGGTTCCATGCTGCAGAGATGTTCTCTGAAACATGACTTGAGCTTTGCATCTGGTGTAACCATACCTGCTGGAGCTGTATTGGTTGTACCAGTTGAATTGGTACAGAAAGATGAATTCAATTGGGGGAGTGATGCAAGTCATTTCAATCCTTACCGATTTCTCTCAACTGTTACAAATAGATCAGGTTCTGCTGAAGACCTTTCTGATACAGGGTTCAGTTCATTTGTGCTAAAGGATCCAAATGAAAATGCAGCATTCCTGCCTTTTGGATCTGGTGCACGTGCTTGCATTGGACAGAAATTTATCATCCAACTTGTTGCCTCAGTGTTGGCATCATTGCTAAATAAATATGAGATACGGCTTAGCTCAGACTCAAATGCAGACTCAAACACAACCTTGAAGAATAATCTTCTGCAGCGTCATCCCAGTTCACAGATATTATTCGTGAAAAGGGACCAGTGA 1401 0.4047 MYGPIVKLWLGPTQLLVSVRDPMLIQDMLIKAEDKLPYTGKLFHLAFGQSSLFAPSFEKVQKRRELLATELNERLLKNGDMIPVKVADFITDKIETIEKKGGLDSRLVSQHIAFTIMGVTFFGDGFLASPKAAMYEELFMTIAKDACFWASYNVTPFWRRGFWKYQCLCTKLKCLTQDILQHCRKGCKLSSHTGQDVHYESSTEEMKSADGAQCCSDDEFQDYYFFRDLKDHQDGKEEPCGNVMRMIFHGCQTTSVLITDVLTRLVMHGEIQDKVYSEISMVRRNPSKFEHEDVYRMPLLLATIYESARLLPTGSMLQRCSLKHDLSFASGVTIPAGAVLVVPVELVQKDEFNWGSDASHFNPYRFLSTVTNRSGSAEDLSDTGFSSFVLKDPNENAAFLPFGSGARACIGQKFIIQLVASVLASLLNKYEIRLSSDSNADSNTTLKNNLLQRHPSSQILFVKRDQ 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00275 466 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 402 411 IPR017972 GO:0005506|GO:0016705
Viun1g00275 466 Gene3D Cytochrome P450 1 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00275 466 PRINTS E-class P450 group IV signature 297 313 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00275 466 PRINTS E-class P450 group IV signature 393 409 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00275 466 PRINTS E-class P450 group IV signature 409 427 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00275 466 CDD cytochrome_P450 3 457 - -
Viun1g00275 466 Pfam Cytochrome P450 2 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00275 466 PANTHER CYTOCHROME P450 FAMILY 4 5 437 - -
Viun1g00275 466 SUPERFAMILY Cytochrome P450 2 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00275 466 PRINTS P450 superfamily signature 249 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00275 466 PRINTS P450 superfamily signature 302 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00275 466 PRINTS P450 superfamily signature 400 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00275 466 PRINTS P450 superfamily signature 409 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00275 Viun-Chr1 1694211 1699184 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00275 42 431 Cytochrome P450 AT1G13710 24.750 1.09e-19 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00275 - - vum:124847778 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g00275 1 1694211 1699184 Viun1g00275 1 1694211 1699184 ECH