Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00274 ATGTATGGACCTATTGTTAAACTGTGGTTAGGTCCTACTCAACTTTTGGTGTCAGTAAGGGATCCAATGTTAATACAAGACATGCTTATAAAAGCTGAGGATAAGTTGCCTTACACAGGAAAATTGTTTCATCTGGCCTTTGGGCAATCAAGCCTCTTTGCCCCTTCATTTGAAAAGGTGCAAAAGAGAAGGGAACTATTGGCAACAGAATTAAACGAAAGATTGCTGAAGAATGGTGATATGATTCCTGTGAAAGTTGCAGACTTTATCACAGATAAAATAGAAACCATAGAAAAGAAAGGAGGTCTTGATTCCAGGTTGGTTTCTCAGCACATCGCTTTCACTATAATGGGAGTCACATTCTTTGGAGATGGCTTCTTGGCCTCACCGAAGGCTGCAATGTATGAGGAACTGTTCATGACCATTGCTAAAGATGCTTGCTTTTGGGCCTCCTATAATGTTACTCCTTTCTGGAGACGTGGATTTTGGAAGTACCAATGCTTATGTACAAAGTTGAAATGCTTAACTCAAGACATCCTTCAACATTGTAGAAAAGGTTGTAAACTATCTAGCCATACTGGGCAAGATGTACATTATGAAAGTTCCACTGAAGAAATGAAGTCAGCAGATGGTGCACAATGCTGTTCTGATGATGAGTTCCAAGATTACTATTTCTTTCGAGATCTTAAGGATCATCAAGATGGTAAAGAAGAGCCTTGTGGGAATGTCATGCGCATGATATTTCACGGATGTCAAACTACCTCTGTTCTAATCACGGATGTATTGACTAGGCTTGTCATGCATGGGGAAATACAGGATAAGGTTTATTCGGAGATTAGCATGGTAAGAAGAAACCCATCGAAATTTGAGCATGAAGATGTTTATAGGATGCCGTTGTTATTGGCTACAATTTATGAATCTGCACGCCTTCTTCCCACTGGTTCCATGCTGCAGAGATGTTCTCTGAAACATGACTTGAGCTTTGCATCTGGTGTAACCATACCTGCTGGAGCTGTATTGGTTGTACCAGTTGAATTGGTACAGAAAGATGAATTCAATTGGGGGAGTGATGCAAGTCATTTCAATCCTTACCGATTTCTCTCAACTGTTACAAATAGATCAGGTTCTGCTGAAGACCTTTCTGATACAGGGTTCAGTTCATTTGTGCTAAAGGATCCAAATGAAAATGCAGCATTCCTGCCTTTTGGATCTGGTGCACGTGCTTGCATTGGACAGAAATTTATCATCCAACTTGTTGCCTCAGTGTTGGCATCATTGCTAAATAAATATGAGGATATGCACCTACTATTCTCTCGAGGAATAACAAAGATAAGGAAGGCAAGAAAATGGACACAGTTAAAGCACCAGAGAAAAGGACACGCACCTACTATTTTCTCGAGGAATAACAGGGATAAGGAAGGCAAGAAAATGGACATAGTTAAAGCACCAAAGAAAAGGTATTATTCCTTTATTCAACAACATTGCATTTGA 1491 0.3991 MYGPIVKLWLGPTQLLVSVRDPMLIQDMLIKAEDKLPYTGKLFHLAFGQSSLFAPSFEKVQKRRELLATELNERLLKNGDMIPVKVADFITDKIETIEKKGGLDSRLVSQHIAFTIMGVTFFGDGFLASPKAAMYEELFMTIAKDACFWASYNVTPFWRRGFWKYQCLCTKLKCLTQDILQHCRKGCKLSSHTGQDVHYESSTEEMKSADGAQCCSDDEFQDYYFFRDLKDHQDGKEEPCGNVMRMIFHGCQTTSVLITDVLTRLVMHGEIQDKVYSEISMVRRNPSKFEHEDVYRMPLLLATIYESARLLPTGSMLQRCSLKHDLSFASGVTIPAGAVLVVPVELVQKDEFNWGSDASHFNPYRFLSTVTNRSGSAEDLSDTGFSSFVLKDPNENAAFLPFGSGARACIGQKFIIQLVASVLASLLNKYEDMHLLFSRGITKIRKARKWTQLKHQRKGHAPTIFSRNNRDKEGKKMDIVKAPKKRYYSFIQQHCI 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00274 496 PRINTS P450 superfamily signature 302 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00274 496 PRINTS P450 superfamily signature 409 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00274 496 PRINTS P450 superfamily signature 249 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00274 496 PRINTS P450 superfamily signature 400 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00274 496 PANTHER CYTOCHROME P450 FAMILY 4 5 431 - -
Viun1g00274 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 402 411 IPR017972 GO:0005506|GO:0016705
Viun1g00274 496 Gene3D Cytochrome P450 1 444 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00274 496 Pfam Cytochrome P450 2 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00274 496 SUPERFAMILY Cytochrome P450 2 431 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00274 496 PRINTS E-class P450 group IV signature 297 313 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00274 496 PRINTS E-class P450 group IV signature 409 427 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00274 496 PRINTS E-class P450 group IV signature 393 409 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00274 496 CDD cytochrome_P450 3 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00274 Viun-Chr1 1688606 1699186 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00274 42 431 Cytochrome P450 AT1G13710 24.750 2.04e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00274 - - vun:114187015 1011.52