Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00241 ATGAGCTACCATGAAGCACACCAAAGGGCTGCAAAATCTGTTTGCTCTGTTTGCCATAACAGAAGACCACAGTATGAAAGAAACAGAAAAAAAGAGTTCTCATATGCTGAGTTGTGTGCAGCCACACAAGGGTTTTCCCTTAAGAACTATCTGTCAGAAGGGGGGTTTGGTTCTGTCTATAAAGGGGAGTTGTGTGGACAGAAGATTGCTGTGAAGCAACACACTTATTCTAACCAAAAGGGAGAGAAGGAATTCAAGTCTGAAGTTGATGTTCTCAGCAAAGCAATGCATGAGAATGTGGTCATGCTGTTAGGATCATGCTCAGAACGGAACCTTAGACTTCTTGTGTATGAATATATCTGCAATGCTTCATTGGACCAACATTTATCTCAACATTCTCGTAAACTTCTTGATTGGCCAGACAGGGTGAAAGTAGCTGATGGAGTTGCCAAAGGACTACTATACCTGCATGAGAATAACATAATACACAGAGATCTGACAGCAAACAACATTCTTCTTACACATGACTATGATGCATTGCTAGGCGATTTTGGTTTGGCTAGAACTGTGATTGAAGACTCCTCATACTCCACAGAATGTGTGGGGAATACGGGTTATATGGCACCAGAATATGCAGAATTTGGCAAAGTGTCAATTAAAACAGATGTGTATTCCTTTGGGGTGGTTCTACTACAGCTAATAACAGGAATGAAACCTATAGATAAAAGACTTGGAGAAAGAACTCTTGTGGGATGGGTTGTTGATGCTTTGACTCACATAGTGGAAGGCAAAACACCTGACTGCATCTTAAGAGATTACAATTACTCCCCTGCAAGGTCAAATTCAATTTAA 852 0.4073 MSYHEAHQRAAKSVCSVCHNRRPQYERNRKKEFSYAELCAATQGFSLKNYLSEGGFGSVYKGELCGQKIAVKQHTYSNQKGEKEFKSEVDVLSKAMHENVVMLLGSCSERNLRLLVYEYICNASLDQHLSQHSRKLLDWPDRVKVADGVAKGLLYLHENNIIHRDLTANNILLTHDYDALLGDFGLARTVIEDSSYSTECVGNTGYMAPEYAEFGKVSIKTDVYSFGVVLLQLITGMKPIDKRLGERTLVGWVVDALTHIVEGKTPDCILRDYNYSPARSNSI 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00241 283 PANTHER OS01G0750732 PROTEIN 12 258 - -
Viun1g00241 283 FunFam Proline-rich receptor-like protein kinase PERK8 5 119 - -
Viun1g00241 283 FunFam Os07g0541700 protein 120 203 - -
Viun1g00241 283 ProSitePatterns Tyrosine protein kinases specific active-site signature. 161 173 IPR008266 GO:0004672|GO:0006468
Viun1g00241 283 Gene3D Transferase(Phosphotransferase) domain 1 121 279 - -
Viun1g00241 283 Gene3D Phosphorylase Kinase; domain 1 15 119 - -
Viun1g00241 283 ProSiteProfiles Protein kinase domain profile. 45 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g00241 283 SUPERFAMILY Protein kinase-like (PK-like) 20 252 IPR011009 -
Viun1g00241 283 Pfam Protein tyrosine and serine/threonine kinase 47 242 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00241 Viun-Chr1 1511343 1513374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00241 28 262 Trihelix Transcription Factor Family AT5G38560 48.361 4.65e-71 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Viun1g00241 PK_Tyr_Ser-Thr 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00241 - - vun:114181742 577.4