Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00212 ATGGCTGAAGTCATCAACATGCCCCCCGAATCTCTCGATCAATCTCCCTCTGCTTCCGCTCCTCCTCCACCCCCTCCACCAGCCACTTCCGCCGCCGAAGATGACCCCCCTCCCCCACGCCGCCGGGACCGCCGCGACGATCGGGAATTAGACCGTCACCCCAACCGTAGCCGCGATTACTACGACCGCGACAGGGACTTCAAGCGACGCCGTAGCCCCAGCCCCGGCTACCGCGACCGCCGCTACTCTCCACAGCCGCCATCGCGCCGCTCTCCTCCGCCGTATAAGCGGTCTCGGAGGGGCAGCCCCCGTGGTTATGGACCTGAGGACAGATTTGGGTATGAGTATTTTGGTGGCTATGAACGGGGAGTGGGTGGAAGGACTGGTTATGCAGATGAGAAGTCTTACGGCAGGCTTGCCCATCGATCTGGCGCGGGATATCATAATGGGATGTCTGATGTGGGTGGTTATGCAGATTTGTCAAGTGGAGGTGCACAAAGAGAGGGGTTGATGTCCTATAAACAATTCATTCAGGAGCTTGAAGATGATGTACTGCCAGCTGAAGCTGAGCGTAGGTATCAAGAATACAAATCAGAGTATATTTCTACTCAAAAAAGAGCTTATTTTAATGCTCATAAGGATGAGGAGTGGTTAAAAGATAAATATCATCCAACAAATTTACTGACAGTAATTGAAAGGAGGAACGAAAATGCTCGAAGACTTGCCAAAGATTTTTTGCTGGACTTGCAGAGTGGAACATTAGACCTAAATCCTGGTTTGAATTCCTCTTCGTCCAATAAGTCAGGGCATGTCAGTGAACCTAATTCAGAGGAAGAAACAGATGGTGGCATTAAGCGAAGAAGACATGGTAGGGGACCTAATAAAGACAATGATTTCTCAGCTGCACCAAAGGCTCACCCTATCAGTTCCGAACCTAGACGGATACAAGCAGATATTTTAAAAGCTCAGGCTGTTGTTCGTAAGCTTGACATGGAGAAGGGTATTGAAGATAACATCTTATGTACTAGTGACCACAACAGAAATGATGACAAGTCTCACAGTGGGTCTGTGGGCCCCATAATAATAATCCGAGGCTTAACATCTGTGAAGGGATTAGAGGGTGTTGAGCTTTTGGACACACTTATTACATATCTTTGGCGCATTCATGGTATTGATTATTATGGAATGGTTGAGATTAACGAGGCCAAGGGATTTAGACACGTGAGACCAGAAGGAACAGGGCATGAAGAAACAAGTAAATCAGGTTCCGAATGGGAGAACAAACTTGATTCATTTTGGCAGGACAGGTTGAATGGTCAGGATCCATTGGAGTTGATGACTGCCAAGGAGAAGATAGATGCTGCCGCAGCTGATGTGTTGGATCCATATGTTAGAAAAATTAGGGACGAGAAATATGGGTGGAAGTATGGTTGTGGAGCTAAGGGCTGCACAAAGCTTTTTCATGCGGCTGAATTTGTATACAAACATTTGAAACTAAAACATCCTGAGCTTGTAATGGAACTGACATCAAAATTACGTGAGGATCTTTATTTTCAAAATTACATGAATGATCCTGATGCTCCTGGTGGAACACCTGTCATGCAGCAACCTCAGAAGGATAGGTCTATAAAGCGAAGATTAGGGGGTTTGGAGGGCCGATTAAAGGATGACCGTGGTAATCGGCGAGACCAGGACAGGAATGACAAAATGAATGGAGACAACAGTTCCCCATCAAATGAAAGGCAAATGGGCAACCATGATGAAGCAATGTATGAATACGGAGGGCCTGGTGTACCTCCATTTACCTCAGATATGCCCCCTCCTCCACCAGTTTTGATGCCTGTACCTGGTGCTGGGCCTTTGGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCAATGCAGATGTTAAGGGAGCAAGGAGGACCGTCGTACGATGGCTCAGGAAGGAAGATGCGATCTGGTCCTCATATGGGTGGACCAGCAGGGCCTATAATTGCTGTCCCTCCATCCTTTAGACCAGATCCTCGACGGATGCGAAGCTATCAAGATCTGGATGCCCCTGAGGACGAAGTAACTGTGATAGACTATCGGAGCTTGTAG 2100 0.479 MAEVINMPPESLDQSPSASAPPPPPPPATSAAEDDPPPPRRRDRRDDRELDRHPNRSRDYYDRDRDFKRRRSPSPGYRDRRYSPQPPSRRSPPPYKRSRRGSPRGYGPEDRFGYEYFGGYERGVGGRTGYADEKSYGRLAHRSGAGYHNGMSDVGGYADLSSGGAQREGLMSYKQFIQELEDDVLPAEAERRYQEYKSEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIERRNENARRLAKDFLLDLQSGTLDLNPGLNSSSSNKSGHVSEPNSEEETDGGIKRRRHGRGPNKDNDFSAAPKAHPISSEPRRIQADILKAQAVVRKLDMEKGIEDNILCTSDHNRNDDKSHSGSVGPIIIIRGLTSVKGLEGVELLDTLITYLWRIHGIDYYGMVEINEAKGFRHVRPEGTGHEETSKSGSEWENKLDSFWQDRLNGQDPLELMTAKEKIDAAAADVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHPELVMELTSKLREDLYFQNYMNDPDAPGGTPVMQQPQKDRSIKRRLGGLEGRLKDDRGNRRDQDRNDKMNGDNSSPSNERQMGNHDEAMYEYGGPGVPPFTSDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGPSYDGSGRKMRSGPHMGGPAGPIIAVPPSFRPDPRRMRSYQDLDAPEDEVTVIDYRSL 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00212 699 MobiDBLite consensus disorder prediction 35 77 - -
Viun1g00212 699 MobiDBLite consensus disorder prediction 523 583 - -
Viun1g00212 699 MobiDBLite consensus disorder prediction 256 271 - -
Viun1g00212 699 MobiDBLite consensus disorder prediction 1 113 - -
Viun1g00212 699 Pfam SERRATE/Ars2, N-terminal domain 174 256 IPR021933 -
Viun1g00212 699 MobiDBLite consensus disorder prediction 272 295 - -
Viun1g00212 699 PANTHER ARSENITE-RESISTANCE PROTEIN 2 40 697 IPR039727 GO:0006397
Viun1g00212 699 MobiDBLite consensus disorder prediction 539 570 - -
Viun1g00212 699 MobiDBLite consensus disorder prediction 638 686 - -
Viun1g00212 699 MobiDBLite consensus disorder prediction 256 314 - -
Viun1g00212 699 MobiDBLite consensus disorder prediction 15 34 - -
Viun1g00212 699 Pfam Arsenite-resistance protein 2 417 595 IPR007042 -
Viun1g00212 699 ProSitePatterns Zinc finger C2H2 type domain signature. 478 501 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00212 Viun-Chr1 1301009 1310516 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00212 77 699 C2H2 Transcription Factor Family AT2G27100 62.787 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00212 K27103 - gmx:100817569 1097.8