Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun1g00209 | ATGCACCACCAATTCACACAAAAAATGGGAACTCATCCATTCATGCTTGCTATCACCATTTTCAAGCTACTATTAGTCTTCTTCTCTCAATCTTCCGCGGCATCAGACACCATCACTCAATCTCAGCCACTTCATGATGATGGCAGCACCTTAGTTTCCAAAGATGGAACCTTTGAGTTAGGGTTCTTCAGTCCCGGTAGTTCCACAAACCGCTACATAGGAATATGGTACAAAATCATCCCAGTCAAAACCATTGTCTGGGTTGCCAACCGTGACAATCCAATCAAAAGCAGCAACAACAGCAACAGCAACAACATGTTAACCATCACCAATGAAGGAAACATGGTACTTCTCGACAACAACAATGAAACTGTCTGGTCAACAAACATGACATCACTCACAACTCAACCTCTGTTGAGTCCCATAGTGCAGCTCTTAGACACTGCAAACTTGGTAGTTAAAGAAGGGAACAACAACAAAAACAGTAACAGCAACAGCAACAACAACAACGAGAAAGAAGGAAACTTTTTGTGGCAAAGCTTTGACTACCCTTGTGATACTCTCTTGCCAGGAATGAAGCTTGGATGGGACCTTAAAAAGGGTATTGAAAGGAAGTTAAGGGCATGGAAGAGTTGGGATGATCCATCTTCAGGGAACCTAACTTGGGGTATGCTCCTTAGTAGTTACCCTGAATTGGTTCTGAAGAAAGGTTCGGTTGAGTATCATAGGAGTGGACCTTGGAATGGAGCAGGGTTCAGTGGCCAACCAGTGTTGAGAATCACTCCAATTGTTGACACCAAATTCGTGAATGATTCAGATGAGGTTTACTACTCATACTCTCTCAGGAACAAGTCTGTGATCTCAATAACTTACTTGAACCAAACCCTTCTTCATCGCCAACGCATTACATGGATTCCTGAGAACAAAACCTGGAGGGTTTATGAGTCTGTTCCCAGAGATGATTGTGATCCTTATAACACATGTGGTCCAAATGGAAATTGCATGGTTAATGAGACACCGATTTGCCAGTGTTTGGAAGGGTTTCGACCAAAATCTCACCAGAATTGGAACACTTTCGACTGGTCACAAGGATGTGTTCGTAGTGAACCTTGGAGTTGTCGGGTGAAAAACCAAGATGGTTTTCGGAGATTTGCTTCGATGAAGGTTCCTGATACGAGAAGTTCTTGGACTTATGGAAACATGTCTCTTGAAGATTGTAGAATTCAATGCTTGAAAAACTGTTCTTGCATGGCTTATTCAAACTTGGACATAAGGGAAGGTGGAAGTGGTTGTGCCATTTGGTTTGGTGATCTTGTTGATTTGAAATTGGTTCAAGCAAGCCAACAAGACATATACATTCGAATGGCTGTTTCAGGTTCAGATGAAGATACAAGAAAAAGGGTTTTAGTAATTACGATTCCAATTGTGTCGTCGGTCACTGTTTTGCTACTTGTTGTCTTCGTATGCATTTACCTGAGAAAAAGAAAGCAAAAAGGAAATGAACACGGCACACAAAATATTGTATCAACCGAAGACGATGAAGAAAACCAAGATTTTGAGCTTCCTTTGTTCGACCTCGCTTTGATATTCAATGCCACCAATGGCTTCTCGGAAGACAACAAACTTGGAGAAGGTGGTTTTGGACCGGTATATAAGGGTACACTCCGGGATGGAAGAGATATTGCCATCAAAAGACTCTCAAGGGGTTCATCTCAAGGGATCAAAGAATTCAAGAATGAAGTTATATTGTGTGCAAAACTTCAACATCGAAATCTTGTTAAGGTTCTTGGTTGTTGCATTCAAGAAGAAGAGAAAATGTTAATATATGAATATATGCCCAACAGAAGCTTAGATTCATTTCTTTTCGATTCAACTCAAAGTAAACTTTTAGATTGGTCGAAACGCTTCAACATCATATGTGCAATTGCTCGTGGACTTCTTTATCTACATCAAGATTCTAGACTAAGGATCATACATAGAGATCTGAAAGCAAGTAATATTTTGCTAGATTATGACCCAAAAATTTCAGATTTTGGCTTAGCACGACTTTGTGGAGATGATCAAATTGAAGGGAATACAAAAAGAGTGGTTGGAACATATGGTTATATGGCACCAGAATATGCGATTGATGGTTTATTCTCCATAAAATCCGATGTATTCAGTTTTGGTATACTATTGTTAGAGATTGTGAGTGGAAAGAAAAACAAAGGAGTTACATATACAAGTGACACTTATAATCTCATTGGACATGCTTGGAAATTGTGGAAAGAGAATGATCCAACAAAATTGGTTGATACTTCTTTAGAAGAGTCGTACGTTGTATCAGAAGTGTTGCGTTGCATTCAAGTTGGTCTTTTATGTCTACAACATCATCCCAATGATAGACCAAACATGGCATCTGTGGTTGTTATGTTGACCAATGAAACTATTTTAGCTGAACCAAAGGAACCTGGTTTCTTGATAGAAAGAGTGATCCCTAGTGAAGTAGAATCTTCTAGTGAAAAATTAATATCTTTTTCAGTGAATGAATTGTCTATTTCACTAGTGGATGCTAGATAA | 2559 | 0.3943 | MHHQFTQKMGTHPFMLAITIFKLLLVFFSQSSAASDTITQSQPLHDDGSTLVSKDGTFELGFFSPGSSTNRYIGIWYKIIPVKTIVWVANRDNPIKSSNNSNSNNMLTITNEGNMVLLDNNNETVWSTNMTSLTTQPLLSPIVQLLDTANLVVKEGNNNKNSNSNSNNNNEKEGNFLWQSFDYPCDTLLPGMKLGWDLKKGIERKLRAWKSWDDPSSGNLTWGMLLSSYPELVLKKGSVEYHRSGPWNGAGFSGQPVLRITPIVDTKFVNDSDEVYYSYSLRNKSVISITYLNQTLLHRQRITWIPENKTWRVYESVPRDDCDPYNTCGPNGNCMVNETPICQCLEGFRPKSHQNWNTFDWSQGCVRSEPWSCRVKNQDGFRRFASMKVPDTRSSWTYGNMSLEDCRIQCLKNCSCMAYSNLDIREGGSGCAIWFGDLVDLKLVQASQQDIYIRMAVSGSDEDTRKRVLVITIPIVSSVTVLLLVVFVCIYLRKRKQKGNEHGTQNIVSTEDDEENQDFELPLFDLALIFNATNGFSEDNKLGEGGFGPVYKGTLRDGRDIAIKRLSRGSSQGIKEFKNEVILCAKLQHRNLVKVLGCCIQEEEKMLIYEYMPNRSLDSFLFDSTQSKLLDWSKRFNIICAIARGLLYLHQDSRLRIIHRDLKASNILLDYDPKISDFGLARLCGDDQIEGNTKRVVGTYGYMAPEYAIDGLFSIKSDVFSFGILLLEIVSGKKNKGVTYTSDTYNLIGHAWKLWKENDPTKLVDTSLEESYVVSEVLRCIQVGLLCLQHHPNDRPNMASVVVMLTNETILAEPKEPGFLIERVIPSEVESSSEKLISFSVNELSISLVDAR | 852 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun1g00209 | 852 | Gene3D | Transferase(Phosphotransferase) domain 1 | 612 | 815 | - | - | |
Viun1g00209 | 852 | Gene3D | Phosphorylase Kinase; domain 1 | 496 | 611 | - | - | |
Viun1g00209 | 852 | SUPERFAMILY | Protein kinase-like (PK-like) | 517 | 823 | IPR011009 | - | |
Viun1g00209 | 852 | Pfam | Domain of unknown function (DUF3403) | 806 | 852 | IPR021820 | GO:0004674 | |
Viun1g00209 | 852 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 21 | 796 | - | - | |
Viun1g00209 | 852 | CDD | B_lectin | 47 | 184 | IPR001480 | - | |
Viun1g00209 | 852 | Gene3D | Hepatocyte Growth Factor | 372 | 455 | - | - | |
Viun1g00209 | 852 | ProSiteProfiles | EGF-like domain profile. | 318 | 354 | IPR000742 | - | |
Viun1g00209 | 852 | Gene3D | - | 29 | 181 | IPR036426 | - | |
Viun1g00209 | 852 | ProSiteProfiles | Protein kinase domain profile. | 536 | 810 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun1g00209 | 852 | Pfam | S-locus glycoprotein domain | 243 | 352 | IPR000858 | GO:0048544 | |
Viun1g00209 | 852 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 85 | 215 | IPR036426 | - | |
Viun1g00209 | 852 | CDD | PAN_AP_plant | 372 | 456 | - | - | |
Viun1g00209 | 852 | Pfam | Protein tyrosine and serine/threonine kinase | 539 | 803 | IPR001245 | GO:0004672|GO:0006468 | |
Viun1g00209 | 852 | SMART | ntp_6 | 376 | 455 | IPR003609 | - | |
Viun1g00209 | 852 | PIRSF | SRK | 7 | 852 | IPR024171 | GO:0004674 | |
Viun1g00209 | 852 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 612 | 813 | - | - | |
Viun1g00209 | 852 | Pfam | PAN-like domain | 373 | 441 | IPR003609 | - | |
Viun1g00209 | 852 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 657 | 669 | IPR008271 | GO:0004672|GO:0006468 | |
Viun1g00209 | 852 | ProSiteProfiles | Bulb-type lectin domain profile. | 35 | 166 | IPR001480 | - | |
Viun1g00209 | 852 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 500 | 611 | - | - | |
Viun1g00209 | 852 | SMART | serkin_6 | 536 | 805 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun1g00209 | 852 | Pfam | D-mannose binding lectin | 84 | 210 | IPR001480 | - | |
Viun1g00209 | 852 | ProSiteProfiles | PAN/Apple domain profile. | 373 | 456 | IPR003609 | - | |
Viun1g00209 | 852 | CDD | STKc_IRAK | 542 | 807 | - | - | |
Viun1g00209 | 852 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 30 | 181 | - | - | |
Viun1g00209 | 852 | SMART | blect_4 | 41 | 184 | IPR001480 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun1g00209 | Viun-Chr1 | 1269532 | 1273191 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun1g00209 | 468 | 820 | Receptor kinase-like Gene Family | AT4G23190 | 51.811 | 1.50e-123 | 383 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Viun1g00209 | PK_Tyr_Ser-Thr | 8.7e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun1g00209 | - | - | gmx:100776310 | 1077.39 |