Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00155 ATGAATAATTTTTCTCATGTTCCCCCTGGTTTTAGGTTCCACCCAACTGATGAGGAACTTGTTGACTACTACCTGAGGAAGAAAGTTTCCTCAAGAAGGATTGACCTAGATGTGATAAAAGATGTTGACCTATATAAAATTGAGCCATGGGATCTTCAAGAACTTTGCAGAATAGGAACAGAAGAGCAGAATGAATGGTACTTCTTCAGCCACAAAGATAAGAAGTATCCAACAGGAACTCGAACAAATAGAGCAACTGCAGCAGGGTTTTGGAAAGCAACTGGAAGAGACAAAGCTATCTATTCAAAGCATGAGTTGATAGGAATGAGGAAAACCCTAGTTTTCTACAAAGGTCGAGCCCCCAATGGACAAAAATCAGATTGGATCATGCACGAGTATCGACTTGAAACAGATGAAAATGGCACACCCCAGGAAGAAGGATGGGTCGTGTGTAGAGTATTCAAAAAGAGACTAACAACCATGAGAAAACTGAGTGAGCATGATTCTCCATGTTGGTACGATGAACAAGTTTCTTTCATGCAAGACATGGATTCACCAAAGCAAAGTTCTCAACCTAATAATTTGCCCTACCAGTTTCCATATCCATGCAAGAAAGAGCTAGATTTGCCCTACCATCTCCACCTTCCATTGGAGAACCAAAAACTGCTTCAATCTGCATCCAACTCAATCACACCATATGCTGTAGTAGAACAAAACCATGTCATGCACCAAGTCTCAATCATGCACCAAGTTCAACACTCTGCTCAACAACAAAATTTTCAGACAGTGTTTGGAAACAGTGGCAATGAACAAGTTGCAGATTGGAGAGCTCTTGACAAGTATGTTGCTTCACAACTCAGTCAGGAAGATGCACCCAAAGAGAACAGTTTCTCAAACACCAACACCAACTCCACCAACAACAACAACAACATGTTTCTTGGGAAGAACAATGACAACATTGAACAGTTGGGAGACATGGAGAAGGAGGAAATGATGCCTGAAAATGCCTCAACTTCAAACTCAAGCTGTCCAATTGACATGTGGAAATAG 1050 0.4114 MNNFSHVPPGFRFHPTDEELVDYYLRKKVSSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHELIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRLTTMRKLSEHDSPCWYDEQVSFMQDMDSPKQSSQPNNLPYQFPYPCKKELDLPYHLHLPLENQKLLQSASNSITPYAVVEQNHVMHQVSIMHQVQHSAQQQNFQTVFGNSGNEQVADWRALDKYVASQLSQEDAPKENSFSNTNTNSTNNNNNMFLGKNNDNIEQLGDMEKEEMMPENASTSNSSCPIDMWK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00155 349 MobiDBLite consensus disorder prediction 286 317 - -
Viun1g00155 349 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Viun1g00155 349 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 300 - -
Viun1g00155 349 MobiDBLite consensus disorder prediction 333 349 - -
Viun1g00155 349 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Viun1g00155 349 MobiDBLite consensus disorder prediction 288 317 - -
Viun1g00155 349 MobiDBLite consensus disorder prediction 330 349 - -
Viun1g00155 349 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Viun1g00155 349 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Viun1g00155 349 FunFam NAC domain-containing protein 16 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00155 Viun-Chr1 1002683 1005436 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00155 1 349 NAC Transcription Factor Family AT1G12260 57.808 3.64e-138 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun1g00155 NAM 2.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00155 - - gmx:100775867 563.533