Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00151 ATGGCTTCCTTCCAAATTCTCACCATTGTTGCATTCTTCATTCTTCTAGCCAAACCTAGCACCACTTCAGCTTGTGAAAATTCTACCATCTCCACCAACTTCACCCAAACCAAGATTGAATACAGTGCCAGCAATTATGGAAACACAAGCACTACACAAACCTTCAAAAACTACATCAAAACCTCATGCAACTCAACCACATATCCATCAATATGCTACAGCACTTTATCCCCATATGCTGCAAAAATTGGAGCAGATCCATTGAAGCTGTGCAGTGTGTCTCTCTCCATGGCATATAAGGCAGCAAAAAGTGCATCCACCAACATATCAAAGATTCTGAAGAAAAACAACATGACAAGGATTGCTGAACAAGTGGTGCAAGATTGCTTTGGAAATGTGAAGGACTCCATTGGTGAGCTCAAAGATTCCCTTGATTCATTGGGAAATTTGGATGGTGCAGACAGAAAGTTTCAGATCAGCAACATAAAGACATGGGTGAGTGCTTCCATCACCAATGACCAAACTTGTTCTGATGGGTTTGATGAGATGAATGTTGATTCATCTTTGACGGCAAAAATCAGAACTGGTGTTTTGGATGTGGCAAGAAAAACCAGCAATGCTTTGTATTTCATCAACAACAATTTGTACTGA 651 0.404 MASFQILTIVAFFILLAKPSTTSACENSTISTNFTQTKIEYSASNYGNTSTTQTFKNYIKTSCNSTTYPSICYSTLSPYAAKIGADPLKLCSVSLSMAYKAAKSASTNISKILKKNNMTRIAEQVVQDCFGNVKDSIGELKDSLDSLGNLDGADRKFQISNIKTWVSASITNDQTCSDGFDEMNVDSSLTAKIRTGVLDVARKTSNALYFINNNLY 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00151 216 CDD PMEI-like_3 61 213 - -
Viun1g00151 216 Pfam Plant invertase/pectin methylesterase inhibitor 58 208 IPR006501 GO:0004857
Viun1g00151 216 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 214 IPR035513 -
Viun1g00151 216 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 208 - -
Viun1g00151 216 NCBIfam pectinesterase inhibitor domain 49 213 IPR006501 GO:0004857
Viun1g00151 216 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 213 IPR035513 -
Viun1g00151 216 SMART PMEI_2 54 210 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00151 Viun-Chr1 985620 986331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00151 59 213 Carbohydrate Esterase AT1G53830 27.848 1.36e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00151 - - gmx:100527443 339.732