Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00150 ATGGCGAACTTTTGGGTTCTTCTTCTCGTTGTCCTCTGCAGCTTCCACAGTTGCCTGAGCGCCTCCACCCCCACGAACTTCATAAAGTCGTCGTGCAGCGCCACCCAGTACCCCGCCCTCTGCGTGGAGTCGCTGTCGGTGTACGCCGCCGCCATCCAGCAGGACCCTCACCAGCTGGTGCAGACGGCGCTCTCCCTGGCCCTCAACCGGACCGAGTCGACGAAAAGCTTCGTGGCGAAGTGCAACAAGTTCAGGGGTCTGAAGCCGCGGGAGTACGCCGCCCTCAAAGACTGCGCCGAGGAGATCAGCGACAGCGTGGACCGGCTGTCGCGGTCGCTGAAGGAGCTGAAGCTCTGCAAGGTGAGCGGCGAGGACTTCGCCTGGCACATCAGCAACGTGGAGACGTGGGTCAGCTCTGCGCTCACCGACGAGAGCACGTGCGGCGACGGCTTCGCCGGAAAGGCGCTCGGCGGAAAGATCAAAGACGCCATCAGGGGCAGAATGGTGAATGTCGCTCAGGTCACCAGCAATGCCCTCTCTCTCATCAACCAGTATGCTGCCAAACACTAG 570 0.6193 MANFWVLLLVVLCSFHSCLSASTPTNFIKSSCSATQYPALCVESLSVYAAAIQQDPHQLVQTALSLALNRTESTKSFVAKCNKFRGLKPREYAALKDCAEEISDSVDRLSRSLKELKLCKVSGEDFAWHISNVETWVSSALTDESTCGDGFAGKALGGKIKDAIRGRMVNVAQVTSNALSLINQYAAKH 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00150 189 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 185 IPR035513 -
Viun1g00150 189 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 185 IPR035513 -
Viun1g00150 189 FunFam Pectin methylesterase inhibitor 1 23 185 - -
Viun1g00150 189 SMART PMEI_2 23 181 IPR006501 GO:0004857
Viun1g00150 189 Pfam Plant invertase/pectin methylesterase inhibitor 26 181 IPR006501 GO:0004857
Viun1g00150 189 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 181 - -
Viun1g00150 189 NCBIfam pectinesterase inhibitor domain 6 185 IPR006501 GO:0004857
Viun1g00150 189 CDD PMEI-like_3 30 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00150 Viun-Chr1 967118 967951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00150 24 182 Carbohydrate Esterase AT5G53370 31.250 8.80e-21 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00150 - - gmx:100305900 315.849