Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun1g00106 | ATGGCTGGGATTGATGATAATGTTGCCCTTTCTGGCGATTGGGGTCTTGCTAGCCCAAGTCCAAGAACATTTTTCTCTAGAATGTTGGAGGAAGAAAATGTAACAAGATCAATCTCAGAGCATTCTGGGAGTGGTAGAACTGGGGAATTCTTTTCAGGACCACATGAGCCTAGTGAAACAGGAAAGGGAAACATGCAGGATGCAGCACAAGATGGAGATTCTGTAGCCCAATTGAGTTTTCAGACTGAGCAAAAGCCTAACTCCAGAGGTGGTCTTGTGGAAAGAATGGCTGCTAGAGCTGGATTTAATGCTCCTAGGTTGAACACTGAAGGCATTAGATCTACTGATCTTTCACTCAATTCTGACATTCAGTCTCCTTACTTGACCATCCCACCAGGTCTCAGTCCTACTACACTTTTAGATTCTCCAGTGTTCCTTGCAAATTCACTGGCACAGCCATCTCCAACAACTGGAAAGTTTCTGTTTATGTCAAATGGCAACATGCGGCACTCAGAATTATCATCTGATGCTCCAGAAAAATGTAAAAATAATGGCTTTGATGATATCTATACATCATCCTTTGCTTTCAAGCCTGCAACAGACTCAGGCTCCTCTTTCTATCATGGTGCTGGAAGAAAAATAAATCCAACTACACTTCCTCAACAATCCCATCCTGGTATTGAGGTTTCAGCTCAGTCAGAAAATTCTTTTCATTCTCAAAGTGTCGATGCTGTCAAAGTTCAAACTGAGAACAAAAATGGTCTTCATCTTCAGGCAGACTTTGCCGAATCGCCTCCTGAAAAGGATATTAAAATGTTTCGAGCTGATCAAAGGGCTTTTGATGCTGTTGGTGGTGGCATTGAACATTCTACCCCAGTTGAAGAGCATGGAGATGAAGAAGGAGATCAGAGAGGCAATGGAGATTCAGTGACTGGTGGCGTTGGGGGTGCACCATCTGATGATGGATATAACTGGAGAAAATATGGCCAAAAACAAGTGAAAGGCAGCGAGTACCCTCGAAGTTACTACAAGTGCACACATCCAAACTGTCAAGTTAAGAAGAAAGTAGAACGATCCCATGAAGGCCACATAACTGAGATCATCTACAAGGGAACACACAACCATCCAAAACCTCCTCCAAGTCGCCGATCAGGTATAGGTTCGGTTAACCCTCACACTGACATGCAAGTTGACAACCCTGAACATGTTGAACTACACAATGGTGGTGACGGCGACATCGGCTGGGGTAATGTGCAAAAGGGAAACATAGTTGGAGCTGCTAACTGGAAGCATGAAAACCTTGAAACAACATCATCAGCGTCTATTGGCCCCGAGTACTGCAACCAGTCCACCAATTTGCAGACGCAAAATGGTGGTACTCTCAATGATTCAGGAGAGGCAGTTGATGCCTCGTCTACTTTTTCTAACGAAGAAGATGAAGATGATCAAGGCACTCATGGTAGTGTATCATTAGGTTATGATGGGGAAGGAGATGAATCAGAGTCTAAGAGAAGGAAACTGGAATCATATGCTGACCTGAGTGGAGCTACTAGAGCCATCCGTGAGCCTAGAGTTGTTGTACAAACTACCAGTGAGGTAGATATCCTCGATGATGGTTATCGGTGGCGCAAGTATGGACAAAAAGTTGTCAAAGGAAATCCCAACCCAAGGAGTTACTACAAGTGCACAAATGCAGGCTGCACAGTAAGGAAACATGTGGAGAGAGCATCACACGATCTTAAATCCGTGATCACCACTTATGAGGGAAAGCACAACCATGATGTTCCTGCTGCTCGTGCCAGCAGCCATGTCAATGCTAATGCTTCCAATGCCAACCAAGCTTCCGGTGTTCTTCACAGCCATGTTCATAGACCTGAACCATCACAAGTACACAATGGCATGGGAAGGCTTGAGAGGCCGTCCCTAGGCTCGTTTAACCTACCCGGAAGACAGCAGCTAGCTCATTCCCACGGCTTCTCCTTCGGCATGAACCAACCGATGCTATCAAATCTGGCAATGTCAGGGTTAGGCCACATGCAAGCCAAGCTCCCTGTCATGCCTGTTCATCCATTCTTGGCACAGCAACAACAGCAAAATCCTTCAAACGATTACGGTTTCATGATGCCAAAGGGAGAGCCAAATGTGGAGGCTATTCCTGAACATGTTGGTGGCCTTAACCTGCCAAATGGCTCATCAGTGTACCAAGAAATCATGAGTCGCATGCCCCTTGGACCTCACATGTAA | 2244 | 0.4541 | MAGIDDNVALSGDWGLASPSPRTFFSRMLEEENVTRSISEHSGSGRTGEFFSGPHEPSETGKGNMQDAAQDGDSVAQLSFQTEQKPNSRGGLVERMAARAGFNAPRLNTEGIRSTDLSLNSDIQSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFLFMSNGNMRHSELSSDAPEKCKNNGFDDIYTSSFAFKPATDSGSSFYHGAGRKINPTTLPQQSHPGIEVSAQSENSFHSQSVDAVKVQTENKNGLHLQADFAESPPEKDIKMFRADQRAFDAVGGGIEHSTPVEEHGDEEGDQRGNGDSVTGGVGGAPSDDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGTHNHPKPPPSRRSGIGSVNPHTDMQVDNPEHVELHNGGDGDIGWGNVQKGNIVGAANWKHENLETTSSASIGPEYCNQSTNLQTQNGGTLNDSGEAVDASSTFSNEEDEDDQGTHGSVSLGYDGEGDESESKRRKLESYADLSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARASSHVNANASNANQASGVLHSHVHRPEPSQVHNGMGRLERPSLGSFNLPGRQQLAHSHGFSFGMNQPMLSNLAMSGLGHMQAKLPVMPVHPFLAQQQQQNPSNDYGFMMPKGEPNVEAIPEHVGGLNLPNGSSVYQEIMSRMPLGPHM | 747 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun1g00106 | 747 | MobiDBLite | consensus disorder prediction | 370 | 413 | - | - | |
Viun1g00106 | 747 | Gene3D | WRKY domain | 311 | 379 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Viun1g00106 | 747 | SMART | WRKY_cls | 319 | 377 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun1g00106 | 747 | SMART | WRKY_cls | 536 | 595 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun1g00106 | 747 | MobiDBLite | consensus disorder prediction | 216 | 241 | - | - | |
Viun1g00106 | 747 | MobiDBLite | consensus disorder prediction | 63 | 88 | - | - | |
Viun1g00106 | 747 | Pfam | WRKY DNA -binding domain | 537 | 593 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun1g00106 | 747 | Pfam | WRKY DNA -binding domain | 320 | 376 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun1g00106 | 747 | ProSiteProfiles | WRKY domain profile. | 320 | 378 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun1g00106 | 747 | ProSiteProfiles | WRKY domain profile. | 531 | 596 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun1g00106 | 747 | MobiDBLite | consensus disorder prediction | 285 | 326 | - | - | |
Viun1g00106 | 747 | SUPERFAMILY | WRKY DNA-binding domain | 528 | 596 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Viun1g00106 | 747 | SUPERFAMILY | WRKY DNA-binding domain | 318 | 378 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Viun1g00106 | 747 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 140 | 615 | IPR044810 | GO:0003700 | |
Viun1g00106 | 747 | Gene3D | WRKY domain | 523 | 589 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Viun1g00106 | 747 | FunFam | WRKY transcription factor 33 | 523 | 589 | - | - | |
Viun1g00106 | 747 | MobiDBLite | consensus disorder prediction | 440 | 472 | - | - | |
Viun1g00106 | 747 | MobiDBLite | consensus disorder prediction | 1 | 89 | - | - | |
Viun1g00106 | 747 | FunFam | WRKY transcription factor | 311 | 379 | - | - | |
Viun1g00106 | 747 | MobiDBLite | consensus disorder prediction | 291 | 305 | - | - | |
Viun1g00106 | 747 | MobiDBLite | consensus disorder prediction | 440 | 507 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun1g00106 | Viun-Chr1 | 759590 | 764064 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun1g00106 | 1 | 742 | WRKY Transcription Factor Family | AT5G56270 | 48.903 | 0.0 | 550 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Viun1g00106 | WRKY | 3.8e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun1g00106 | K18835 | - | gmx:100127395 | 1295.03 |