Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00093 ATGGAAAGTGAAAGAGAGGACAACAACAAAGGCACTGATTCAACACACGCTGCCATCTCTAGCACACTTAAAATTAAGATTGTGAGCTGCAGCAAAAGTGGGGAGAGTTTAGACAACTCAAACTTACCCTCACCAAACATAAACAATGGCATAGAGTCATCACCTTATGGTTCTCCTCTTGTGTCACCACCTTCATCAGCATTTGTTTCTGCATTGCAGTCTCCATATATATCTCCAAGGGCCATTATTCCAGACCCACCTAATGGATCTCCTTTGGAAAACCAACCAGAACTACTAACAATAGCCACTTCCACCACCAACCCTTCCACCCCTGAAGATGTGCCTAGCAGTTCCTACACTCCCCCTTCTGATCAATATGAGTTCTCTGATGACGCTGCTGACACAAGGCTCAAGTATGTGACATGTGTTCCTGAACCGGCTCCTCCACGCATTTCATTCTCATTTCCAGTCCCTAGAATTTCCTTTGCAAAAGGCCCTATCTCACCTGCAACCAATGCCAAACTCAGAAGCTGTGATGTCTATATTGGGTTTCATGGCCAGAATCCCAACTTGGTGCGCTTCTGCAGGTGGCTCAAGTCTGAGCTTGAGCTTCAAGGGATCGATTGCATGCTTGCTGACAGAGCAAAGTACTCAGACAGTCAGAGTCATGAGATTGCTGATGGAGTCATTTGCTCAGTGGCTTTTGGAGTGGTGGTTGTTACAAGTTCCAGCTTCCTCAACCATTTTAGCATGGAGGAGGTGAGATTCTTTGCTCAAAAGAAGAACTTGATTCCCCTCTTGTTTGACACGGGACCTGCAGAAATTATGGCTCTTCTCAACTGCAAATCAATTGACAAAGAATGTAAAGAGGCAATAGATGGACTTATGAAGTGCAATGAATTCAATCTAGAAGCCAATGATGGTAATTGGCGAAGCTGCATAGCGAAAGCTGCTGGTATTTTAAGAGCAAGACTTGGTAGGAAGAATGCTGAGCAGAAGGATAATGTACAAGGACTTGAGAACTTACCCTTTCCAAGGAACACGTACTTTGTAGGAAGAGAGAAGGAGATTATGGAGATTGAGGGTCTTTTTTTCGGTCGAGGGAATGGCATGGAACAAGTCCAAGATCATTGTAAGGCATTCACCAAAGGAGAAGCTAGTGGAAGTGGACAATCTGAAGGCCTTGCAGATGAGGAAAGTGAACCAGTGATAGCTAGGTGTGGGAGGTATATCAGTCTAGAAATGGGGAGAAGCAAAGAACCAACTTTAGAGGCTTGGGTTGAACCGATCATGGGAAACAACTCTTTGAAGAGGTTGAAGAATAAGAAATCAAAGAGTGGAAACTACAAGAGCGTGTGCAGCAGTGTGATTTGCATTAATGGGGTTTCTGGGATTGGAAAGTCAGAGCTGGCACTAGAATTTGCTCATAGATATCACCAGAGGTACAAAATGGTCTTGTGGGTTGGTGGTGAAGCCAGGTATCTGAGGCAGAACTTATTGAACTTGTCTCTCAATTTGGGATTGGATGTTGGTGCTGATTCTGAAATGGAAAGGGGTAGGATTCGTAGCTTTGAGGATCAAGAATTTGAGGCATTCAAGAGAGTGAAGAGGGAACTGTTTGGTGAGACTCCTTACTTGCTGATAATTGACAATCTTGAGACAGAAGAGGAATGGTGGGAAGGGAAGGATCTGTATGACTTGATACCAAGAAACACAGGAGGAACACATGTGATCGTTACTACAAGATTGTCCAAAGTAATGAGCTATGATACGATTCAGCTTCCACCTTTGCCATTATCTGATGCAATGATTCTGATGATAGGAAGAAAGAGGAAAGAGTATTCGGCAGATGAGATAGACCTGCTTGAAAAAATCAATGAGAAACTTGGAAGGTTGAGCTTTGGTTTGTGGATGATTGGTTCACTGCTGGCTGAACTTTCAATAGGCCCTTCTTGTCTCTATGAGGCCATTAACCAGGTGCCACTGGATGAAGATTCAAACTCCTGCTATATGAGCATTGCAGAAGGGCAATGGTGCAAGAGCAACCCTTTTCTCATGAAGACCCTTCTCTTTTGTTTGGAAACTTTGGAGAAAACTAAAGCTAAAGGGAACCTCTTGGCCATAAGAATGCTCCTTGTAAGTGGCTGGTTTTCCCCTTCTCCCATTTCAGCCAGTTTATTAGCCAATGCAGCAAAGAGTATTCCTACAGTGGAAAACCGTCTCAAAAAGTGGACCAAATCTCTGAGCCTAACAAGTTGTTTATCACCACGGACATGGAAAAATGAAGAAGAATCAGCAATGATTCTTGTGAAAATGGGACTGGCTAGAAGGGCTAATCACCATGATGGATGTTGGCTTCATTTCCACCCCATAACACAAGCATTTGCCAAAAGAAAAGGTGGTTTGCAATATGCCAAAGCTGCAATTCAAGGAGTGAGGAAAATGGGAAGCCAAGTTAACTCAGATCATTTGTGGACCTCAGCTTTTCTTGTTTTTGGGTTCAAATCTGAGCCTCCTCTGGTGCAGCTGAAGGCAATTGACATGGTTTTGTACATCAAGAGAACAGCTCTTCCTCTAGCAATTCAAGCCTTCACCTCTTTCTCAAGATGCAACTCATCCTTGGAGCTCTTGAGGGTGTGCACCAATGCTCTTGAGGAAGTTGAGAAATCTTTTGTGTCTCAAATCCAAGATTGGTCTTCCCATGGTTCAGTTTGTTGGAAAAGGAGACTCCAAAGAGGCCAAAAAGTAGATGAATATGTGTGGCAGGATGTGACCTTGTTGAAGGCAACACTGCTGGAGACAAGAGCAAAGTTGCTAGCAAGAGGGGGGCATCTAGACAGTGCCAAGGAACTGTGCAGAACATGCATCAGTATCAGAACTGTGATGCTTGGCCATAACCATGCACAGACCTTGGCTGCTCAAGACACATTGGCAAGGTTGGTGAGAATGAGGAGTAAGATATGA 2964 0.4399 MESEREDNNKGTDSTHAAISSTLKIKIVSCSKSGESLDNSNLPSPNINNGIESSPYGSPLVSPPSSAFVSALQSPYISPRAIIPDPPNGSPLENQPELLTIATSTTNPSTPEDVPSSSYTPPSDQYEFSDDAADTRLKYVTCVPEPAPPRISFSFPVPRISFAKGPISPATNAKLRSCDVYIGFHGQNPNLVRFCRWLKSELELQGIDCMLADRAKYSDSQSHEIADGVICSVAFGVVVVTSSSFLNHFSMEEVRFFAQKKNLIPLLFDTGPAEIMALLNCKSIDKECKEAIDGLMKCNEFNLEANDGNWRSCIAKAAGILRARLGRKNAEQKDNVQGLENLPFPRNTYFVGREKEIMEIEGLFFGRGNGMEQVQDHCKAFTKGEASGSGQSEGLADEESEPVIARCGRYISLEMGRSKEPTLEAWVEPIMGNNSLKRLKNKKSKSGNYKSVCSSVICINGVSGIGKSELALEFAHRYHQRYKMVLWVGGEARYLRQNLLNLSLNLGLDVGADSEMERGRIRSFEDQEFEAFKRVKRELFGETPYLLIIDNLETEEEWWEGKDLYDLIPRNTGGTHVIVTTRLSKVMSYDTIQLPPLPLSDAMILMIGRKRKEYSADEIDLLEKINEKLGRLSFGLWMIGSLLAELSIGPSCLYEAINQVPLDEDSNSCYMSIAEGQWCKSNPFLMKTLLFCLETLEKTKAKGNLLAIRMLLVSGWFSPSPISASLLANAAKSIPTVENRLKKWTKSLSLTSCLSPRTWKNEEESAMILVKMGLARRANHHDGCWLHFHPITQAFAKRKGGLQYAKAAIQGVRKMGSQVNSDHLWTSAFLVFGFKSEPPLVQLKAIDMVLYIKRTALPLAIQAFTSFSRCNSSLELLRVCTNALEEVEKSFVSQIQDWSSHGSVCWKRRLQRGQKVDEYVWQDVTLLKATLLETRAKLLARGGHLDSAKELCRTCISIRTVMLGHNHAQTLAAQDTLARLVRMRSKI 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00093 987 PANTHER DNA REPAIR PROTEIN RADA 49 982 - -
Viun1g00093 987 SMART AAA_5 453 611 IPR003593 GO:0016887
Viun1g00093 987 Coils Coil 322 342 - -
Viun1g00093 987 Gene3D - 430 593 IPR027417 -
Viun1g00093 987 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 159 297 - -
Viun1g00093 987 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 342 659 IPR027417 -
Viun1g00093 987 Pfam NB-ARC domain 436 588 IPR002182 GO:0043531
Viun1g00093 987 MobiDBLite consensus disorder prediction 103 125 - -
Viun1g00093 987 MobiDBLite consensus disorder prediction 33 66 - -
Viun1g00093 987 Gene3D - 163 293 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00093 Viun-Chr1 658307 662425 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00093 - - gmx:100781208 1775.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g00093 1 658307 662425 Viun1g00093 1 658307 662425 ECH