Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00033 ATGGAGTTTGAATCTGAAGATGCTGCTAAGATATTCTACGACGAATATGCACGACGTGTTGGATTTGTCATGCGTGTGATGTCATGTAGACGCTCAGAGAGGGATGGTAGGATTCTTGCCCGCAGGCTTGGGTGCAACAAAGAGGGTTATTGTGTCAGCATCCGAGGGAAATTTTCATCAGTTCGTAAACCTAGGGCCAGCACAAGGGAAGGGTGTAAGGCAATGATTCATATCAAATATGAGAAATCTGGAAAATGGGTGATAACAAAGTTTGTGAAGGATCATAATCATCCATTAGTAGTCTCTCCTCGTGAAGCACGCCAAACAATGGATGAGAAGGATAAGAAAATTCAGGAATTAACAGCAGAGCTTCGGCATAAAAAACGGTTGTGTGCAACATATCAAGAACAACTTACTTCCTTTATGAAGGTTGTTGAAGAGCACAATGAAAAGCTATCTACGAAAATTCATCTTGTAGTTAATAATCTCAAAGAATTTGAATCCATAGACGAGGTTTTGCACCAAACAGCCGCGAATCACGTTGTAGTTGATCATTAA 558 0.4068 MEFESEDAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFSSVRKPRASTREGCKAMIHIKYEKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTAELRHKKRLCATYQEQLTSFMKVVEEHNEKLSTKIHLVVNNLKEFESIDEVLHQTAANHVVVDH 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00033 185 Coils Coil 110 137 - -
Viun1g00033 185 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 168 - -
Viun1g00033 185 Pfam FAR1 DNA-binding domain 12 100 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00033 Viun-Chr1 352785 356891 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun1g00033 FAR1 2.2e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00033 - - vun:114192680 375.17