Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g03071 ATGGCTTTCTGGGGAGTGGAAGTGAAACCGGGAAAGCCTTTTACTCATAAATACGAGGATTCCAAAGGACGCCTCCATATTTCAATGGCCACTCTTGGGTTGGGCACTGCGACAGCTAAAAGCACACTCCAGTGCAATGTGGGAAACAGGAGCCCTGTATATCTATGCTCTCTCTATCCTGGAAACGCAGAGTCATTGCAATTAAACTTAGAGCTCGAAGAAGTTGATCAAGTTCTTTTCTCTGTAATTGGCCCTCGGAGCATTCATCTCTGCGGGTACTATCTCGCCACTGCCCGCAACGCCAATCTTATTGATGATTCTGAATCATATGGGGAGGATATCGCTGATACAGAAACAGAGAGATCTGATTACAGTGACGAAGATGGGTATGAAGATAGTTTTATTGACGATGACATTGTTCCAGAGGCTTCCTCACCATCTCTTATTTCCAAAGAAGAGGAAGCTTCTCATGACAACGGACCAAAAATTAGGAAAGGCAGTCTTCGACGGCTTAGGAAGATGTACCGGTCAGGCGAGTCAGATGATGATGGCTGTGGCGGAGAAAAGATAATTGTCGATGACAGAATGCATGACCAAAACCAGGAAACTGACAATGAAGATAGCCTACCCATTTCATCTCTTTACAAGAATAAAGCCTCTGGAAGGGTCTTGGACAAAGAAGTGGATGCTAGTGTCGTCAGAGGAGCTGGTTATGCCAGCAACAAGAATGGGGGTGGAAATAATATTTTTGAAACAAATCTAGAGGCTGGACATGTCCTTGTAGATAGTCAGACACAAAGGGAAGCTGTGCCATCAAAGCACTTGGTAGATCCTTGCACATCTCTGGATGTTGGGGATATTAAAAGTCCAAAGAAGAAAAAGAAGAAAAAGGAAAAAGGGACAAAGAGTTCCTGTAATGGCCATTCTATCAAACTAGATAATGTTATAGATGAGCTAAAAATCGAAGAGATGAACCAGGTTGTTGTGGCAGGAGGGAAACAAGAGCAGCATGTTGATGATATGGAAACTGAGACCACAGATAAAATACTGCCTTCCTCTCAGGTTGATCATGGACTGGGTGAAAAGCCAAAGAAGAAAAGAAAAGAAAGATCTAAAGAGGGGATGGTTTCAATTGCTACTGATGGTTATCAAAACAGTCTTGTTAATCTGCCTCTAAGAAATGAACAGCACACAGTTAATGACAGGGATGTTAAAATTTCAGGCAATGTTGCATTGTCTTCTGCTGAGATGGATCCTAAAAAGAATAGAGCAAAGAGGAAAAAGAAAGAACAAGTAAACAAAAGTGACGATGGATATAATGAAGATATCTTCCAAGAGGACAAGGTCAACAGAGATGCAGCAGGGTCACAGAATGCGATTCCTAATTTTTTTGAAGAAAAAGAGCAGCATCAGAAGCGAACTAATGAGAAGATGGTAGACAATGGTGCTTATGACTTACCTGATGGAAATCAATCGGAGAATAGAAAAGTTAAGAAAAGGAAGAAAATGAGTAAAAGTCAGGGCAATGGGGAAGTTGTAAATTCTAATGTAGCTGTATATGTTGAGCGAAGTGGTGAGACTGAGATGGAGGAGGACAGAAGTAAGGGGGATAATGCAAAACCCTCCAATGTTAGAACATTGACAAATGGACTAGTTATTCAGGAACAAGAGAAGGGGAAAAAAGATGGCAAAATCGCAGCTTCAGGAAAAAAGATTAGCATCTATTACACTGGCAAGTTGAAGGAAAATGGAGCTGTCTTTGAGTCAAACGCTGGCCAAACTCCTTTCAAATTTCGCCTTGGTAAAGGAGAGGTTATCGAGGGTTGGGATGTTGGCCTTGAAGGCATGCAAGTTGGAGAAAAGAGAAGACTTGTCATTCCACCAACACTGACGTCTGAGAGTGATGGACACTCTGACAAAATACCACAAAATTCATGGTTGATTTATGACATTGAACTTGTTAAAGTTCATTGA 1974 0.4164 MAFWGVEVKPGKPFTHKYEDSKGRLHISMATLGLGTATAKSTLQCNVGNRSPVYLCSLYPGNAESLQLNLELEEVDQVLFSVIGPRSIHLCGYYLATARNANLIDDSESYGEDIADTETERSDYSDEDGYEDSFIDDDIVPEASSPSLISKEEEASHDNGPKIRKGSLRRLRKMYRSGESDDDGCGGEKIIVDDRMHDQNQETDNEDSLPISSLYKNKASGRVLDKEVDASVVRGAGYASNKNGGGNNIFETNLEAGHVLVDSQTQREAVPSKHLVDPCTSLDVGDIKSPKKKKKKKEKGTKSSCNGHSIKLDNVIDELKIEEMNQVVVAGGKQEQHVDDMETETTDKILPSSQVDHGLGEKPKKKRKERSKEGMVSIATDGYQNSLVNLPLRNEQHTVNDRDVKISGNVALSSAEMDPKKNRAKRKKKEQVNKSDDGYNEDIFQEDKVNRDAAGSQNAIPNFFEEKEQHQKRTNEKMVDNGAYDLPDGNQSENRKVKKRKKMSKSQGNGEVVNSNVAVYVERSGETEMEEDRSKGDNAKPSNVRTLTNGLVIQEQEKGKKDGKIAASGKKISIYYTGKLKENGAVFESNAGQTPFKFRLGKGEVIEGWDVGLEGMQVGEKRRLVIPPTLTSESDGHSDKIPQNSWLIYDIELVKVH 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g03071 657 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Viun11g03071 657 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 569 657 IPR001179 GO:0003755
Viun11g03071 657 SUPERFAMILY FKBP-like 519 656 - -
Viun11g03071 657 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 379 - -
Viun11g03071 657 MobiDBLite consensus disorder prediction 114 167 - -
Viun11g03071 657 MobiDBLite consensus disorder prediction 524 545 - -
Viun11g03071 657 MobiDBLite consensus disorder prediction 410 447 - -
Viun11g03071 657 MobiDBLite consensus disorder prediction 114 138 - -
Viun11g03071 657 MobiDBLite consensus disorder prediction 467 510 - -
Viun11g03071 657 MobiDBLite consensus disorder prediction 358 375 - -
Viun11g03071 657 MobiDBLite consensus disorder prediction 332 375 - -
Viun11g03071 657 MobiDBLite consensus disorder prediction 418 447 - -
Viun11g03071 657 MobiDBLite consensus disorder prediction 524 539 - -
Viun11g03071 657 Gene3D - 521 657 IPR046357 GO:0003755
Viun11g03071 657 MobiDBLite consensus disorder prediction 281 308 - -
Viun11g03071 657 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 565 654 IPR001179 GO:0003755
Viun11g03071 657 MobiDBLite consensus disorder prediction 151 165 - -
Viun11g03071 657 Gene3D Nucleoplasmin core domain 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g03071 Viun-Chr11 41607644 41615086 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g03071 568 654 Calmodulin-binding Proteins AT5G48570 42.045 1.50e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g03071 K14826 - gmx:100798135 757.673