Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g03066 ATGAGAATGAGGGTTTTGCAGTTGTGTTCTTCCATGGCTTCCACGTGGACATGCAGAGCTCCTCTGCAGGTTGAACTGGGCAAGTTCTGGATTTTGAGAAAAAGGAGTAATTTGCAAGTGCAGTGCTCCGGCAGACCCCCGAGAGCCCCTCCTGGAGTTGACACAAGAATCCACTGGGACAACGAGGATGAAGGGTGGATTGGTGGCGGAGACAGAGAAAAAGACACCAAATCCAGCAACATGTTCGCCGACGGTGATGACTTGGCAGATTTGCTCCTCACTTCTTCTTTAGGCTCTCATTACGAATTCTTAGGAGTATCACCCGATGCGGATTTAGAAGAAATAAAAGTTGCTTATAGAAAACTATCGAAGGAGTATCATCCCGACACAACTTCCCTCCCACTGAAAAGTGCGTCGGAAAAATTCATGAAACTGAGAGAGATTTACAACGTTCTGAGCGACGAAGAGAGTCGAAAATTTTATGATTGGAGCCTTGCTCAAGAGGCTGCAAGCCGACGTGCAGAGAAGATGAGAATGAAATTAGAGGATCCTCGGGAGCAACAACTCAGGAACTGGGAACCTGTTCCCGACATGGTCGACCGCCTCGGTGGAAAGAATATGAAGCTCAGTGATCAGGCTGTCTCTGCCATCACTATTGATGTTTTTATCATTATTTTTTCCATCTGCTGTATCATTTACGTAATCTTTTTTAGAGAACCATATTACTACTAG 732 0.4563 MRMRVLQLCSSMASTWTCRAPLQVELGKFWILRKRSNLQVQCSGRPPRAPPGVDTRIHWDNEDEGWIGGGDREKDTKSSNMFADGDDLADLLLTSSLGSHYEFLGVSPDADLEEIKVAYRKLSKEYHPDTTSLPLKSASEKFMKLREIYNVLSDEESRKFYDWSLAQEAASRRAEKMRMKLEDPREQQLRNWEPVPDMVDRLGGKNMKLSDQAVSAITIDVFIIIFSICCIIYVIFFREPYYY 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g03066 243 ProSiteProfiles dnaJ domain profile. 99 165 IPR001623 -
Viun11g03066 243 ProSitePatterns Nt-dnaJ domain signature. 142 161 IPR018253 -
Viun11g03066 243 Gene3D DnaJ domain 92 185 IPR036869 -
Viun11g03066 243 CDD DnaJ 100 154 IPR001623 -
Viun11g03066 243 FunFam DnaJ homolog subfamily C member 4 89 186 - -
Viun11g03066 243 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 28 241 IPR044618 -
Viun11g03066 243 Pfam DnaJ domain 100 162 IPR001623 -
Viun11g03066 243 PRINTS DnaJ domain signature 137 157 IPR001623 -
Viun11g03066 243 PRINTS DnaJ domain signature 101 119 IPR001623 -
Viun11g03066 243 PRINTS DnaJ domain signature 119 134 IPR001623 -
Viun11g03066 243 SUPERFAMILY Chaperone J-domain 96 166 IPR036869 -
Viun11g03066 243 SMART dnaj_3 98 157 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g03066 Viun-Chr11 41591015 41591928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g03066 100 167 C2H2 Transcription Factor Family AT1G74250 37.500 7.36e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g03066 K23051 - gmx:100819309 326.25