Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun11g03065 | ATGGCTTCCACGTGGACATGCAGAGCTCCTCTGCAGGTTGAACTGGGCAAGTTCTGGATTTTGAGAAAAAGGAGTAATTTGCAAGTGCAGTGCTCCGGCAGACCCCCGAGAGCCCCTCCTGGAGTTGACACAAGAATCCACTGGGACAACGAGGATGAAGGGTGGATTGGTGGCGGAGACAGAGAAAAAGACACCAAATCCAGCAACATGTTCGCCGACGGTGATGACTTGGCAGATTTGCTCCTCACTTCTTCTTTAGGCTCTCATTACGAATTCTTAGGAGTATCACCCGATGCGGATTTAGAAGAAATAAAAGTTGCTTATAGAAAACTATCGAAGGAGTATCATCCCGACACAACTTCCCTCCCACTGAAAAGTGCGTCGGAAAAATTCATGAAACTGAGAGAGATTTACAACGTTCTGAGCGACGAAGAGAGTCGAAAATTTTATGATTGGAGCCTTGCTCAAGAGGCTGCAAGCCGACGTGCAGAGAAGATGAGAATGAAATTAGAGGATCCTCGGGAGCAACAACTCAGGAACTGGGAACCTGTTCCCGACATGGTCGACCGCCTCGGTGGAAAGAATATGAAGCTCAGTGATCAGGCTGTCTCTGCCATCACTATTGATGTTTTTATCATTATTTTTTCCATCTGCTGTATCATTTACGTAATCTTTTTTAGAGAACCATATTACTACTAG | 699 | 0.4578 | MASTWTCRAPLQVELGKFWILRKRSNLQVQCSGRPPRAPPGVDTRIHWDNEDEGWIGGGDREKDTKSSNMFADGDDLADLLLTSSLGSHYEFLGVSPDADLEEIKVAYRKLSKEYHPDTTSLPLKSASEKFMKLREIYNVLSDEESRKFYDWSLAQEAASRRAEKMRMKLEDPREQQLRNWEPVPDMVDRLGGKNMKLSDQAVSAITIDVFIIIFSICCIIYVIFFREPYYY | 232 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun11g03065 | 232 | ProSiteProfiles | dnaJ domain profile. | 88 | 154 | IPR001623 | - | |
Viun11g03065 | 232 | Gene3D | DnaJ domain | 81 | 174 | IPR036869 | - | |
Viun11g03065 | 232 | Pfam | DnaJ domain | 89 | 151 | IPR001623 | - | |
Viun11g03065 | 232 | SUPERFAMILY | Chaperone J-domain | 85 | 155 | IPR036869 | - | |
Viun11g03065 | 232 | ProSitePatterns | Nt-dnaJ domain signature. | 131 | 150 | IPR018253 | - | |
Viun11g03065 | 232 | PRINTS | DnaJ domain signature | 90 | 108 | IPR001623 | - | |
Viun11g03065 | 232 | PRINTS | DnaJ domain signature | 108 | 123 | IPR001623 | - | |
Viun11g03065 | 232 | PRINTS | DnaJ domain signature | 126 | 146 | IPR001623 | - | |
Viun11g03065 | 232 | SMART | dnaj_3 | 87 | 146 | IPR001623 | - | |
Viun11g03065 | 232 | PANTHER | NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC | 21 | 230 | IPR044618 | - | |
Viun11g03065 | 232 | FunFam | DnaJ homolog subfamily C member 4 | 78 | 175 | - | - | |
Viun11g03065 | 232 | CDD | DnaJ | 89 | 143 | IPR001623 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun11g03065 | Viun-Chr11 | 41590795 | 41591928 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun11g03065 | 89 | 156 | C2H2 Transcription Factor Family | AT1G74250 | 37.500 | 6.20e-08 | 50.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun11g03065 | K23051 | - | gmx:100819309 | 320.472 |