Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g03065 ATGGCTTCCACGTGGACATGCAGAGCTCCTCTGCAGGTTGAACTGGGCAAGTTCTGGATTTTGAGAAAAAGGAGTAATTTGCAAGTGCAGTGCTCCGGCAGACCCCCGAGAGCCCCTCCTGGAGTTGACACAAGAATCCACTGGGACAACGAGGATGAAGGGTGGATTGGTGGCGGAGACAGAGAAAAAGACACCAAATCCAGCAACATGTTCGCCGACGGTGATGACTTGGCAGATTTGCTCCTCACTTCTTCTTTAGGCTCTCATTACGAATTCTTAGGAGTATCACCCGATGCGGATTTAGAAGAAATAAAAGTTGCTTATAGAAAACTATCGAAGGAGTATCATCCCGACACAACTTCCCTCCCACTGAAAAGTGCGTCGGAAAAATTCATGAAACTGAGAGAGATTTACAACGTTCTGAGCGACGAAGAGAGTCGAAAATTTTATGATTGGAGCCTTGCTCAAGAGGCTGCAAGCCGACGTGCAGAGAAGATGAGAATGAAATTAGAGGATCCTCGGGAGCAACAACTCAGGAACTGGGAACCTGTTCCCGACATGGTCGACCGCCTCGGTGGAAAGAATATGAAGCTCAGTGATCAGGCTGTCTCTGCCATCACTATTGATGTTTTTATCATTATTTTTTCCATCTGCTGTATCATTTACGTAATCTTTTTTAGAGAACCATATTACTACTAG 699 0.4578 MASTWTCRAPLQVELGKFWILRKRSNLQVQCSGRPPRAPPGVDTRIHWDNEDEGWIGGGDREKDTKSSNMFADGDDLADLLLTSSLGSHYEFLGVSPDADLEEIKVAYRKLSKEYHPDTTSLPLKSASEKFMKLREIYNVLSDEESRKFYDWSLAQEAASRRAEKMRMKLEDPREQQLRNWEPVPDMVDRLGGKNMKLSDQAVSAITIDVFIIIFSICCIIYVIFFREPYYY 232
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Viun11g03065 232 ProSiteProfiles dnaJ domain profile. 88 154 IPR001623 -
Viun11g03065 232 Gene3D DnaJ domain 81 174 IPR036869 -
Viun11g03065 232 Pfam DnaJ domain 89 151 IPR001623 -
Viun11g03065 232 SUPERFAMILY Chaperone J-domain 85 155 IPR036869 -
Viun11g03065 232 ProSitePatterns Nt-dnaJ domain signature. 131 150 IPR018253 -
Viun11g03065 232 PRINTS DnaJ domain signature 90 108 IPR001623 -
Viun11g03065 232 PRINTS DnaJ domain signature 108 123 IPR001623 -
Viun11g03065 232 PRINTS DnaJ domain signature 126 146 IPR001623 -
Viun11g03065 232 SMART dnaj_3 87 146 IPR001623 -
Viun11g03065 232 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 21 230 IPR044618 -
Viun11g03065 232 FunFam DnaJ homolog subfamily C member 4 78 175 - -
Viun11g03065 232 CDD DnaJ 89 143 IPR001623 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Viun11g03065 Viun-Chr11 41590795 41591928 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g03065 89 156 C2H2 Transcription Factor Family AT1G74250 37.500 6.20e-08 50.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g03065 K23051 - gmx:100819309 320.472