Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g03032 ATGTACAATTCCATGGCAGCTTTACTCCTTAATCGCTCCTTCTTCTGCCACCTATTCCTTTTCCTTTTTTGTCTTCCATCTATAAACACACTCTCCACTGTTTCCATTTCTCAAACCCCCAATTCAAACCAAACATTTATTTGCGTCTTGCAACATCCAAATCAACAGGGACAATCAAATCTCAACTGCACCACCTTTCCTCGGACTCAGACTCCGCCTTTCACGCTTGATGTGAATCCTACCGTTACCTACTCTCAGATTGTGGGTGGCAACGGCTTTGTATGTGCTTTGGGGCCATCATCTTCTTCCAGTTCCATCATGGGGTGTTGGAGATTCTCCGGCAATGCTTCTAATGTTCCCTACAAGCGCATCTACAATGGATCCCTTCTCCAAGATATTGACAGTAGCCACTCCCACGTTTGCGGTCTTGTAAATAATAATGACAGTGGCCTAAAGCTTGAGTGTTGGCAATGGCACGACTTCAATTCGAGCAGTGGGAGTTTGAGGAACATGTCAATGTCAAGCATTGCCGTGGGAGAGAATTTTGTGTGTGGGTTATCTCCGACGGGGGATGTTAAATGCACCGGCACGGGGAGGGTTAACAATAGTAGAGTTGTTGTTGATGTTCCTCCGCCTGGCGGGAATTACACTTTTCTCGCAGCTGGGGTTAGGCATGCCTGTGTCCTCTCCGGTGACGGTGGTTTGGATTGTTGGGGAGACATGGAGGGTGAGAAACCAGAAGGGAGGTTCGTTTCTTTGGCGTTGGGAGAGAACCGTAGCTGCGCGCTCGGGCACGACAGAAGAGTTGTCTGTTGGGGGTCCAATAATTTCACCATGCTGCAATCCTTGCAAGACATTTTTGAGTCAATTGTGGCAAAGAAAAGTGTTTTCTGTGGAGTTGTGTCTTCCGATTTTTCCTTCCTCTGTTGGGGTTCTCCGTATTTTGATTCAGACAGCAAGGTGTTTGAAGATGTCCTCCCAGGACCTTGTCGGAACAAGTGCCCTTGTGGGCCCTTGCCCAACTCTGCCAAACTATGTCAGTCTTCTGATGTCATTTGCCAACCCTGTTCCCCTCAAGTAGTTCAATCTTCACTTCCACCTCCACCTCCACCTCCATCACCATCACCATCACCATCTCAGCCATTGCTACCATCAAACAACTCTCGTTGGAGCAGCCGAATGGTTGCATTCCTTGTGGTTGGATGTGTGGGGTGCAGTTCCCTGTTGCTAGTCATAGCTTTCTTCCTTCACAGGCACTGCAAGTCTAAACGCAGAGGAAGCCGTGTCCATGACTCTGGCCGGTTGGATGATGAGTCATCTCACTCTCAACCACAACCTCAAACCGAAGCTGGATCTCGTGTTCTTCAGAAGCGCTTGAGTCACGTGATCAGCATGGGAAATGGGAGCCCTTTGGAGGAGTTTTCCCTCCAGACACTGCTTCAAGTCACCGACAATTTCTCTGAGGAGAAGAGAGTTGGGATTGGAAGCTTCGGTTCGGTGTATCGTGCCACTTTGGAGGACGGGAAGGAGGTAGCTATAAAAAGAGCCGAAGCCTCATCTTCCACATACACAGTCTTGGGTGCCCAAGTGGACAAAGACAATGCTTTCGTGAATGAGCTCGAATCTCTCTCCAGACTCCACCACAAGAACCTGGTCCGTTTGGTGGGGTTCTATGAAGACACTAAAGAACGCATTTTGGTGTACGAGTACATGGACAATGGGAGTCTGAGTGACCATCTCCACAAGCTCCAAACTTCAGCTCTGATGTCATGGCCGGTGCGGATCAAGGTGGCTCTGGATGCTGCCAGAGGCATAGAGTACTTACACCAATACGCCACTCCTCCGATCATTCACCGTGACATAAAATCTGCAAACATATTGTTGGATGCCAAGTGGACTGCGAAAGTCTCTGATTTTGGACTCTCCCTGATGGGACCTGATCCTGAAGATGAGGAGGCTCACCTTTCACTTCTCGCAGCTGGCACTGTTGGCTACATGGACCCTGAATACTACAGGCTTCAACATTTGACCCCCAAGAGTGATGTCTACAGCTTTGGCGTGGTTCTGCTAGAGTTGCTCTCTGGGTACAAGGCCATCCACAAAAACGAAAATGGGGTGCCAAGAAATGTGGTTGATTTTGTGGTGCCATTCATTTTTCAAGATGAGATTCACAGAGTGTTGGACAGAAGAGTGCCCCCTCCCACGCCGTTCGAGATAGAAGCTGTGGCGTTTGTGGGTTATTTGGCAGCAGATTGTGTCAGGCTTGAAGGTCGTGACAGACCAACCATGTCTCAAGTTGTAAATAACTTGGAAAGAGCATTGGCTGCATGTTTAGCCCAACCAATACTCTCGAGGTCCACCACTCACTCTTCTTCGCAATAG 2382 0.4882 MYNSMAALLLNRSFFCHLFLFLFCLPSINTLSTVSISQTPNSNQTFICVLQHPNQQGQSNLNCTTFPRTQTPPFTLDVNPTVTYSQIVGGNGFVCALGPSSSSSSIMGCWRFSGNASNVPYKRIYNGSLLQDIDSSHSHVCGLVNNNDSGLKLECWQWHDFNSSSGSLRNMSMSSIAVGENFVCGLSPTGDVKCTGTGRVNNSRVVVDVPPPGGNYTFLAAGVRHACVLSGDGGLDCWGDMEGEKPEGRFVSLALGENRSCALGHDRRVVCWGSNNFTMLQSLQDTXFESIVAKKSVFCGVVSSDFSFLCWGSPYFDSDSKVFEDVLPGPCRNKCPCGPLPNSAKLCQSSDVICQPCSPQVVQSSLPPPPPPPSPSPSPSQPLLPSNNSRWSSRMVAFLVVGCVGCSSLLLVIAFFLHRHCKSKRRGSRVHDSGRLDDESSHSQPQPQTEAGSRVLQKRLSHVISMGNGSPLEEFSLQTLLQVTDNFSEEKRVGIGSFGSVYRATLEDGKEVAIKRAEASSSTYTVLGAQVDKDNAFVNELESLSRLHHKNLVRLVGFYEDTKERILVYEYMDNGSLSDHLHKLQTSALMSWPVRIKVALDAARGIEYLHQYATPPIIHRDIKSANILLDAKWTAKVSDFGLSLMGPDPEDEEAHLSLLAAGTVGYMDPEYYRLQHLTPKSDVYSFGVVLLELLSGYKAIHKNENGVPRNVVDFVVPFIFQDEIHRVLDRRVPPPTPFEIEAVAFVGYLAADCVRLEGRDRPTMSQVVNNLERALAACLAQPILSRSTTHSSSQ 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g03032 794 CDD STKc_IRAK 493 773 - -
Viun11g03032 794 MobiDBLite consensus disorder prediction 428 454 - -
Viun11g03032 794 MobiDBLite consensus disorder prediction 440 454 - -
Viun11g03032 794 MobiDBLite consensus disorder prediction 364 382 - -
Viun11g03032 794 Gene3D Phosphorylase Kinase; domain 1 449 571 - -
Viun11g03032 794 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 180 785 IPR044815 GO:0004674
Viun11g03032 794 FunFam PTI1-like tyrosine-protein kinase 3 572 781 - -
Viun11g03032 794 MobiDBLite consensus disorder prediction 364 386 - -
Viun11g03032 794 Gene3D - 166 326 IPR009091 -
Viun11g03032 794 ProSitePatterns Protein kinases ATP-binding region signature. 493 515 IPR017441 GO:0005524
Viun11g03032 794 SMART serkin_6 487 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g03032 794 Gene3D Transferase(Phosphotransferase) domain 1 572 781 - -
Viun11g03032 794 ProSiteProfiles Protein kinase domain profile. 487 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g03032 794 Pfam Protein kinase domain 488 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g03032 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Viun11g03032 794 SUPERFAMILY Protein kinase-like (PK-like) 462 771 IPR011009 -
Viun11g03032 794 SUPERFAMILY RCC1/BLIP-II 90 316 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g03032 Viun-Chr11 41455356 41458128 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g03032 30 790 Receptor kinase-like Gene Family AT5G47850 49.294 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Viun11g03032 Pkinase 9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g03032 - - pvu:PHAVU_011G003100g 1352.04