Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g03006 ATGGAGGCCATATCTTCAAAACACCTTATCACGTTCCTTTTCGTGATTCTCTCTTCTAGTTTCACCGCACACAGTGCAGGTCAAAGACCGTACCAAGAAGCGAGCACAGTGTTCATCAGAACATCGTGTAGTTCAACGACATATCCAAGACTGTGCTACAGCTCCCTGGTGAAGCATGCAGACTTGATCCAAACAAATCGCGTGGTGTTGGCCGGCACGGCCTTGAACGTGACTCTTGCGTCGGCGAAATCGACATCGGCAATGATGACGGCGCTGGGGAAGAGACAGGGGCTGAAGCCGAGAGAGGTGGCGGCGATGAAGGACTGCGTGGAGGAGCTGGGTGACTCGGTGGATGAACTCAGAAGGTCCATAGACGAGATGAGTCATCTGAGAGCGTCGAACTTTGAGATGACGATGAGCGACGTGCAGACGTGGGTGAGTGCTGCTCTGACCGATGAGAGCACGTGCACCGATGGCTTCCAAGAGACTGCCACCACCGCCGGTGGCACAAATATCAAGAGCACCGTGAGAGGGCAAGTTGTGCAGGTGGCGCAATTGACCAGCAATGCATTGGCTTTGATAAATCAGCTAGCCAATTCTCATGGCTAA 609 0.532 MEAISSKHLITFLFVILSSSFTAHSAGQRPYQEASTVFIRTSCSSTTYPRLCYSSLVKHADLIQTNRVVLAGTALNVTLASAKSTSAMMTALGKRQGLKPREVAAMKDCVEELGDSVDELRRSIDEMSHLRASNFEMTMSDVQTWVSAALTDESTCTDGFQETATTAGGTNIKSTVRGQVVQVAQLTSNALALINQLANSHG 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g03006 202 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 197 IPR035513 -
Viun11g03006 202 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 199 IPR035513 -
Viun11g03006 202 SMART PMEI_2 34 193 IPR006501 GO:0004857
Viun11g03006 202 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 193 - -
Viun11g03006 202 CDD PMEI-like_3 41 199 - -
Viun11g03006 202 NCBIfam pectinesterase inhibitor domain 8 197 IPR006501 GO:0004857
Viun11g03006 202 FunFam Pectinesterase inhibitor 3 34 198 - -
Viun11g03006 202 Pfam Plant invertase/pectin methylesterase inhibitor 38 193 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g03006 Viun-Chr11 41328658 41329515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g03006 28 200 Carbohydrate Esterase AT3G14310 31.250 6.30e-22 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g03006 - - gmx:100305537 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g03006 11 41328658 41329515 Viun11g03006 11 41328658 41329515 ECH