Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g03005 ATGGAAGCCATTTCTTCTAAGCACCTTCTCACAAATCTCTTGGTGATTTTTTCTTGTAGTTTGGTCACACTCTGTGCCAACACAGGCACTGAAAGACCACATCAACAAGCTAGCACAGTGTTCATCAGAACATCTTGCAGTTCCACCACTTATCCAAGACTCTGCTATAGCTCCTTAGTGAGGCATGCAGAGTTGATCCAAACAAACCGTGTGGTTTTGACCGGCACGGCCCTTAACGTGAGTCTTGCATCGGCCAAATCCACCGCGGCGGTGATATCGACGATGGCCAAGAGGCAGGGGCTGAAGCCCAGAGAGGCTGCAGCCATGAAAGACTGCGTGGAGGTGCTGAATGACTCGGTGGATGAACTCAGAAGGTCCATTGATGGGATGAGTCATCTCAGAAGCTCCAATTTTGAGATGACCATGAGCGACGTACAGACATGGGTCAGTGCTGCTTTGACTGATGAGAACACTTGCACAGATGGATTCCAAGAGATCGCCGCCGCCGCCACCACCACCGCCACCGTTGGTGGTGGTGGCTCAAACACGAAGACCCGTGTCAGAGGACTGGTTGTGCAGGTTGCCCAATTGACCAGCAATGCCTTGGCTTTGATTAACCAACTCGCCAATCACGGTTAA 639 0.5133 MEAISSKHLLTNLLVIFSCSLVTLCANTGTERPHQQASTVFIRTSCSSTTYPRLCYSSLVRHAELIQTNRVVLTGTALNVSLASAKSTAAVISTMAKRQGLKPREAAAMKDCVEVLNDSVDELRRSIDGMSHLRSSNFEMTMSDVQTWVSAALTDENTCTDGFQEIAAAATTTATVGGGGSNTKTRVRGLVVQVAQLTSNALALINQLANHG 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g03005 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 204 - -
Viun11g03005 212 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Viun11g03005 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 210 IPR035513 -
Viun11g03005 212 FunFam Pectinesterase 38 209 - -
Viun11g03005 212 Pfam Plant invertase/pectin methylesterase inhibitor 41 204 IPR006501 GO:0004857
Viun11g03005 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 209 IPR035513 -
Viun11g03005 212 SMART PMEI_2 37 204 IPR006501 GO:0004857
Viun11g03005 212 NCBIfam pectinesterase inhibitor domain 12 208 IPR006501 GO:0004857
Viun11g03005 212 CDD PMEI-like_3 44 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g03005 Viun-Chr11 41323967 41325054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g03005 30 205 Carbohydrate Esterase AT5G53370 31.818 1.50e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g03005 - - vra:106755267 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g03005 11 41323967 41325054 Viun11g03005 11 41323967 41325054 ECH