Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g03004 ATGGCTGTGTTTAGAACACTGGTATCACTAATGTTCCTCTCAACCTTTCTCCAAATAGCAGCAGCATCAGCAAGCACCAGCGACTCACTGAAAGCCTACAAAAAGTTCATAAAAGATGAATGCAATTCAACCACTTACCCAGTAGTTTGTTACAAGTCTCTCTCACCGTACGCATCAAAAATCAAAAGAAACCGCGTAACACTGACGAAGCTGTCGATTCATGTGGCTCTAAAAGCGGCCAAGAGTGCGAAAAGCACGTTGACGAGGTTGTCGAAGGGGAAGCTGTCACACGGAGAAAGCTCGGTGGTGGGTGACTGCAGAGAGAACATCGAGGATACGTTGGATCTGCTTCAACAATCTGCGGAAGGGTTGGCACATTTGAACGGTGCCTCCACTGCGGATGAGAGGTTTCAATGGGACAGCATAAAGACCTGGGTGAGTGCTTCCATAACAGATGAATCTACTTGCATCGATGAGTTTGATGAAATAAAAGTTCGTGCTTCACTGCAGAACAAGATCAAAACCACCGTTTATAACGTTTCTTGGTTGATTAGCAATTCCTTGGCACTCGTCAACAGGCTTTACTAG 588 0.4558 MAVFRTLVSLMFLSTFLQIAAASASTSDSLKAYKKFIKDECNSTTYPVVCYKSLSPYASKIKRNRVTLTKLSIHVALKAAKSAKSTLTRLSKGKLSHGESSVVGDCRENIEDTLDLLQQSAEGLAHLNGASTADERFQWDSIKTWVSASITDESTCIDEFDEIKVRASLQNKIKTTVYNVSWLISNSLALVNRLY 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g03004 195 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 190 - -
Viun11g03004 195 Pfam Plant invertase/pectin methylesterase inhibitor 35 190 IPR006501 GO:0004857
Viun11g03004 195 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 194 IPR035513 -
Viun11g03004 195 NCBIfam pectinesterase inhibitor domain 7 194 IPR006501 GO:0004857
Viun11g03004 195 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 194 IPR035513 -
Viun11g03004 195 SMART PMEI_2 32 190 IPR006501 GO:0004857
Viun11g03004 195 CDD PMEI-like_3 41 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g03004 Viun-Chr11 41321196 41322050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g03004 37 194 Carbohydrate Esterase AT1G53830 28.659 4.96e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g03004 - - gmx:100776299 296.975