Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02982 ATGAAACCTTTTCTTCTCTTTCTCATCACATTCTCCTTCCTCTGTCAAACACTTCTCTCTGCCACGACCCTGCCTCTTCAACTCATCTCCCTCCTCTCACTAAAATCATCCCTCCAAGACCCTCTTAACAACCTCCATGACTGGGATTATTACAACTCCTCCAACTTCACTTCCCAACACCCCATATGGTGTTCGTGGAGAGGCATCACGTGCCACTCCAAAACCTCACAAATCACCACCCTCGACCTCTCCCACCTCAATCTCTCCGGCACAATCTCACCCCAAATCCGCCATTTATCCACCTTGAACCACCTTAACCTCAGCGGAAATGACTTCGGCGGGAGCTTCCAGTACGCCATTTTCGAACTACCGGAACTCAGAACTCTGGACATCAGCCACAACTACTTCAACTCAACCTTCCCACCCGGCACATCAAAGCTCAAGTTCCTCAGGCACTTCAACGCCTACAGCAACAGCTTCACCGGACCCCTCCCCCACGAGTTAACCACCCTTCGTTTTCTGGAACACCTGAACCTCGGCGGAAGCTACTTCAGTGACCGGATTCCGCCCAGTTACGGCACTTTCCCCAGACTCAAGTTTCTCGACTTAGCCGGCAACGCCTTGGGAGGTTCGCTTCCACCCCAATTAGGCCACTTGGCTGAACTGGAACACTTGGAAATTGGGTACAACAATTTCTCAGGAACACTACCTTCGGAACTCTCATTGCTCTCTAATCTCAAATACTTGGACATCTCAACCGCTAACATCTCAGGGAACGTGATTCCGGAGCTGGGAGAACTCACCAACCTGGAGACACTTTTGCTGTTCAAGAACAGGTTAACAGGAGAAATCCCAGCAACCATTGGAAGATTGAAGTTTCTTAAAAGCCTTGACCTCTCAGATAACCAACTCACAGGGCCAATCCCCACCCAAGTCACCATGCTGACGGAACTAACCACGCTCAACCTCATGGAAAACAACCTCACCGGAGAAATACCACAGGGAATCGGAGACCTACCAAAGCTTGAGATTCTGTTCCTCTTCAACAACTCACTCACCGGAACCCTCCCTCAGCAACTTGGCTCCAACGGGTTACTACTGAAACTCGACGTTTCCACAAACTCACTCGAAGGTCCAATCCCTGAAAATGTCTGCAAAGGTAACAGGCTCGTGAGGCTCATACTCTTTCTCAACAAGTTCAGTCATACCCTTCCACCGTCCCTTGGCAGCTGCACCTCGCTCGCTAGGGTTCGCATCCAAAACAATTTCCTCAACGGTTCAATCCCCGAAGGCCTCACGCTCCTCCCTAACCTTACATTCCTAGATATCAGCAGCAACAACTTCCAGGGTCCGATTCCGGAACACTTGGGTAACTTGCAGTACTTCAACATCTCCGGAAACTCCTTCGGAACCTCCTTACCTGCGTCTATTTGGAATGCAACTAATCTCGCGATCTTCTCCGCGGCTTCGTCGAACATCACCGGTCAAATTCCAGATTTCATTGGGTGTCAGCAACTGTATAAGCTCGAATTGCAGGGAAATTTCATCAACGGAACGATTCCATGGGACATTGGACACTGCCAGAAGCTAATTTTGCTCAATCTGAGTCGAAACTCACTCACCGGAATCATTCCCTGGGAAATCTCCACTCTCCCCTCCATCACCGACGTTGATCTCTCGCACAATTCCCTCACCGGAACCATTCCGTCGAACTTCAACAACTGCTCCACTCTCGAGAATTTCAACGTGAGTTTCAACTCCCTCACCGGTCCAATTCCCTCGTCCGGCATCTTCCCGAACCTCCATCCTTCCTCCTACTCCGGGAACCAGGGCCTCTGCGGCGGCGTGTTGGCCAAACCCTGCGCTGCCGACGCCCTCGCCGCCTCCGCCGACGACCAGGTCGACGTCCGCCGCCAGCAGCCGAAGCGAACAGCCGGTGCAATCGTGTGGATCGTGGCCGCCGCGTTCGGCATCGGGCTCTTCGTGCTGGTTGCCGGGACGCGGTGCTTCCACGCGAACTACAACCGGCGGTTCGGAGAGGAGGTCGGGCCGTGGAAGTTAACGGCGTTCCAGCGGCTGAATTTCACGGCGGACGACGTGCTGGAGTGCTTGTCGATGTCCGATAAGATATTAGGAATGGGATCGACGGGGACAGTTTACCGCGCCGAAATGACCGGCGGCGAGATCATAGCGGTTAAGAAGCTTTGGGGAAAACAGAAGGAGAATATCCGCCGGAGAAGAGGGGTTCTGGCCGAGGTGGAGGTGTTGGGAAACGTGAGGCACCGGAATATCGTGAGGTTGTTAGGGTGCTGCAGCAACAGGGAGTGCACCATGCTGCTCTACGAGTACATGCCCAATGGCAACTTGGATGATTTGTTGCATGCCAAAAACAAAGGTGATAATCTCGTCGCTGATTGGTTCACAAGGTACAAGATCGCCTTGGGCGTTGCTCAGGGAATCTCCTACCTCCACCACGACTGCGACCCCGTCATCGTCCACCGCGATCTCAAACCCAGTAACATTCTTTTAGACGCTGAAATGGAGGCAAGAGTCGCCGATTTCGGCGTCGCAAAGTTGATTCAGACCGACGAATCCATGTCCGTCATTGCCGGATCCTATGGCTACATTGCTCCAGAATATGCTTACACCCTTCAAGTGGATGAGAAGAGCGACATTTACAGCTATGGAGTGGTGTTAATGGAGATTCTGAGCGGAAAACGTTCAGTGGAAGCAGCATTTGGAGACGGAAACAGCATAGTGGATTGGGTGAGGTCAAAGATAAAATCAAAAGATGGAATTGATGACATATTGGACAAGAATGCAGGAGCAGGGTGCAGTTCAGTGAGAGAAGAGATGATTCAGATGCTGAGAATTTCATTGCTCTGCACCAGTAGAAACCCTGCAGATAGACCTTGTATGAGGGATGTTGTGTTGATGCTGCAAGAGGCAAAGCCCAAGAGAAAATTGCAGGATAGTGTTGTAGGTGGATTTGGAGGGGACAATGTGGTTGCTGCACCTGACATTCCCCTCCCACAAAAGCCAATCGCAGAACAATGCTAA 3060 0.5163 MKPFLLFLITFSFLCQTLLSATTLPLQLISLLSLKSSLQDPLNNLHDWDYYNSSNFTSQHPIWCSWRGITCHSKTSQITTLDLSHLNLSGTISPQIRHLSTLNHLNLSGNDFGGSFQYAIFELPELRTLDISHNYFNSTFPPGTSKLKFLRHFNAYSNSFTGPLPHELTTLRFLEHLNLGGSYFSDRIPPSYGTFPRLKFLDLAGNALGGSLPPQLGHLAELEHLEIGYNNFSGTLPSELSLLSNLKYLDISTANISGNVIPELGELTNLETLLLFKNRLTGEIPATIGRLKFLKSLDLSDNQLTGPIPTQVTMLTELTTLNLMENNLTGEIPQGIGDLPKLEILFLFNNSLTGTLPQQLGSNGLLLKLDVSTNSLEGPIPENVCKGNRLVRLILFLNKFSHTLPPSLGSCTSLARVRIQNNFLNGSIPEGLTLLPNLTFLDISSNNFQGPIPEHLGNLQYFNISGNSFGTSLPASIWNATNLAIFSAASSNITGQIPDFIGCQQLYKLELQGNFINGTIPWDIGHCQKLILLNLSRNSLTGIIPWEISTLPSITDVDLSHNSLTGTIPSNFNNCSTLENFNVSFNSLTGPIPSSGIFPNLHPSSYSGNQGLCGGVLAKPCAADALAASADDQVDVRRQQPKRTAGAIVWIVAAAFGIGLFVLVAGTRCFHANYNRRFGEEVGPWKLTAFQRLNFTADDVLECLSMSDKILGMGSTGTVYRAEMTGGEIIAVKKLWGKQKENIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGDNLVADWFTRYKIALGVAQGISYLHHDCDPVIVHRDLKPSNILLDAEMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVEAAFGDGNSIVDWVRSKIKSKDGIDDILDKNAGAGCSSVREEMIQMLRISLLCTSRNPADRPCMRDVVLMLQEAKPKRKLQDSVVGGFGGDNVVAAPDIPLPQKPIAEQC 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02982 1019 Gene3D Transferase(Phosphotransferase) domain 1 784 995 - -
Viun11g02982 1019 SUPERFAMILY Protein kinase-like (PK-like) 708 980 IPR011009 -
Viun11g02982 1019 SUPERFAMILY L domain-like 45 381 - -
Viun11g02982 1019 Gene3D Phosphorylase Kinase; domain 1 688 783 - -
Viun11g02982 1019 SUPERFAMILY L domain-like 308 613 - -
Viun11g02982 1019 Pfam Leucine Rich repeat 98 114 IPR001611 GO:0005515
Viun11g02982 1019 Pfam Leucine Rich repeat 293 306 IPR001611 GO:0005515
Viun11g02982 1019 PANTHER RECEPTOR-LIKE PROTEIN 55 356 984 - -
Viun11g02982 1019 Pfam Leucine rich repeat N-terminal domain 27 71 IPR013210 -
Viun11g02982 1019 Gene3D Ribonuclease Inhibitor 189 284 IPR032675 -
Viun11g02982 1019 Gene3D Ribonuclease Inhibitor 285 385 IPR032675 -
Viun11g02982 1019 ProSitePatterns Protein kinases ATP-binding region signature. 711 734 IPR017441 GO:0005524
Viun11g02982 1019 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 213 308 - -
Viun11g02982 1019 SMART serkin_6 705 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02982 1019 FunFam Leucine-rich repeat receptor-like protein kinase TDR 312 623 - -
Viun11g02982 1019 Pfam Protein kinase domain 708 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02982 1019 Pfam Leucine Rich Repeat 437 459 IPR001611 GO:0005515
Viun11g02982 1019 FunFam leucine-rich repeat receptor-like protein kinase TDR 784 992 - -
Viun11g02982 1019 FunFam Leucine-rich repeat receptor-like kinase 27 156 - -
Viun11g02982 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 831 843 IPR008271 GO:0004672|GO:0006468
Viun11g02982 1019 Gene3D Ribonuclease Inhibitor 502 623 IPR032675 -
Viun11g02982 1019 Gene3D Ribonuclease Inhibitor 386 457 IPR032675 -
Viun11g02982 1019 Gene3D Ribonuclease Inhibitor 458 501 IPR032675 -
Viun11g02982 1019 SMART LRR_typ_2 195 219 IPR003591 -
Viun11g02982 1019 SMART LRR_typ_2 267 291 IPR003591 -
Viun11g02982 1019 SMART LRR_typ_2 551 574 IPR003591 -
Viun11g02982 1019 SMART LRR_typ_2 339 363 IPR003591 -
Viun11g02982 1019 SMART LRR_typ_2 315 338 IPR003591 -
Viun11g02982 1019 SMART LRR_typ_2 456 480 IPR003591 -
Viun11g02982 1019 SMART LRR_typ_2 123 147 IPR003591 -
Viun11g02982 1019 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 674 783 - -
Viun11g02982 1019 Gene3D Ribonuclease Inhibitor 28 188 IPR032675 -
Viun11g02982 1019 ProSiteProfiles Protein kinase domain profile. 705 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02982 1019 Pfam Leucine rich repeat 505 564 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02982 Viun-Chr11 41195554 41199632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02982 4 995 Receptor kinase-like Gene Family AT1G08590 43.039 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Viun11g02982 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02982 - - gmx:100809695 1812.35