Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02941 ATGACAATAGCCTTCACCCAATGTTCAGAAAAGCTAGGGTACCTCATTCTTCAGTTAGCCAAAAATTTCATCGTGTATATGGCCATGGTGCTTGCATGCAACGGTTTACATTTCCTTCTAAAGCCCTATTCACAACCTCGCATTACTTCTGACATTGTTGTAGGACTAGTATTGGGGAACATACCTTTTTTACGAAAACTATTCGATGAATTCAACAGAGCCTTTGGATTTATCATAGATTTTGGGATGATGTGTTACATGTTTGCTTTGGGTATAGAGATGGATCCCTACGTGCTGTTCAAACGCCCCAACAAAGATGCTCTCGTTGCATACTGCGCAATATTCTCCACCTTCGCCATTTCCATCACAACGATCCCATTTCTCCATTTCTTCTCACGCTACACCGGCATAGCATTCACCATCTCCATCTCTGCTCTTCTGGCGAGTTCAGCATCTCCGGTTCTCACGCGCCTCATAACAAATCTGAAAATAGGAAAATCAGACATCGGAAAGCTTGTGATAGCAGCGGGAATGCACTCCGATTTAATCTGCTTGTTGGTTTTCTCACTCTGCTACATTTTCATGCCGACCGATTCATACTGCATCGGCCACCACCGTGACAGGACGCTGAAGAGCGACGTCAAAGCCATAATTGCGGTGGTGGTGCAGACGTCGTTCACGGCGGTGGTTTCGCCGGTTTTCTTGGCGTGGGTGAACAATGAGAACCCTGAAGGCAGACCCATGAAAGGGTCGCATCTGGTATTGTCGGTTGCCTTCATGGCCTTGATTTGTGCCCCCTCGACTCTATACGACTTTAGTCCGGTTCTAAGTGCGTTTATGACAGGGATTTGTCTTCCCCGTGATGGAAGAGTTTCCAAATGGATTATCAGCAAAATCAACTACATCTTGTCCACCATCTTCTTCCCCATCTTCTTCTTGTGGATGGGAAATGCAGCTGATGTCACCAAATTCAGACCCGGAGACCCTTTTACTTGGTTAAGGTTTTTTCTTCCCCTTCTCATAGTCGTCTCCGGTAAAGTAATCGGCACACTCATTTCTGGGGCAATCCTTGGCTTTAACTGGCGCGAATCTGTTTTGATCGGAATGCTCCTCGTCACCAAGGGCCATTTTCAAATCTACATGGCAATCAAAGTGGCAAGTATTTTCCTAATTACCGATTACTTCCATCTTTATCAACCTGAGAATTTAAATCGGAAATGCGTAGGAAGCGGTTCACTCTTCGCCAGAGTAGTGTCGCATAAAAAGCTGCTCCCCTTCGATATAAGCGGAGTTCCGGAGTACAGGCCCCAGGTCTTTCCTTTCCTGTATGGCAGGAAGTCCCTCCAGCATCGTGACATGATTACCATTCTCTTGTATTACCAGCTGACCTGTCACCCCAGCACCGATAGTGCCGACTCGGGCCTTCTGTCGGTGGCAGCAATATTTTTCGCAGTGGTGCATTCCCCTGTGATTGTGGCACAGATCATCAGACGTGCGAGGAAAAGGGCACCTACTCACACCAACGCCCTCCAATTGCTGAAGCCATCAAGTGAGTTAAGAATATTCCTATGCCTTCACGGACTTGATAGTGTTCCTGCTTCCATCAACTTCATGGAGATCTCGAGAGGGATATCAGACCCTGGATTAGTAATATATGTCGCAGAAATTATTGAGTTAACTGAACATATAGCATCAACAATGGAGAGTGGTGAAGGAGTACAGAGTAATACTATAAAAGACAAGGCCGTGATAGAGATGAGAGAACAAATAACGAACATGTTTCAGGCCTATATAGATACTGATGGAGATGGTATTACTCTCAAAAGAGCGATGGCACTGTCAACAATCAATAACATGGCGCAGAACATCTGCGTTTTAGCAGAGAACTTGATGGCTGCACTCATTATACTTCCATTCCACAGGAACCAGCGTCAGGACGGAAAATTCGATACTGGAAATCCAGGCTTCAGATATGTGAACCGAAAGTTATTAAAGAACTCTCCTTGTTCGGTGGGAATTCTGGTGAACAGAGGTTTTGGGTCAATTGGGAAAATATCAAGGACTGAGCCATCGGTTAAAGTAGCAGCAATATTCATTGGCGGAAGAGATGATAGAGAAGCACTTTGCTATGTGGGTCGTGTGGCATGGCATAAGGGAGTGCACGTGACAGTGATAAGATTCCTGGTAGATACCAGTGCAGAATCTTCAAGACTTGCAGCTTATAGGGTGACCCTCCCAGAGCAGGAGCAGGAGATGGGATTGGATGATGAATGTTTTGCACAGTTCTATGAACAGCATATAGTTGGAGGTCGCATTTCTTATTTGGAGAAGCATCTTGCAAATGCATCAGAGACCTTCTCTACTCTTAGATCCTTTGAAGGGGAATACTCACTGGTGATTGTAGGAAGAGAAGGTGGAGCAAACTCCATATTGACAAAGGGTATGAATGATTGGCAACAGTGTCCAGAACTGGGACCAATAGGGGACGTTCTTTCAGGACCAGATTTTTCAAAGTCAGTGTCTGTGTTGATAATTCAACAACACAAACTTAGAGGAGAACTAGCTGGGCTTGACGAGGACTTCACTATCATGTAG 2595 0.4532 MTIAFTQCSEKLGYLILQLAKNFIVYMAMVLACNGLHFLLKPYSQPRITSDIVVGLVLGNIPFLRKLFDEFNRAFGFIIDFGMMCYMFALGIEMDPYVLFKRPNKDALVAYCAIFSTFAISITTIPFLHFFSRYTGIAFTISISALLASSASPVLTRLITNLKIGKSDIGKLVIAAGMHSDLICLLVFSLCYIFMPTDSYCIGHHRDRTLKSDVKAIIAVVVQTSFTAVVSPVFLAWVNNENPEGRPMKGSHLVLSVAFMALICAPSTLYDFSPVLSAFMTGICLPRDGRVSKWIISKINYILSTIFFPIFFLWMGNAADVTKFRPGDPFTWLRFFLPLLIVVSGKVIGTLISGAILGFNWRESVLIGMLLVTKGHFQIYMAIKVASIFLITDYFHLYQPENLNRKCVGSGSLFARVVSHKKLLPFDISGVPEYRPQVFPFLYGRKSLQHRDMITILLYYQLTCHPSTDSADSGLLSVAAIFFAVVHSPVIVAQIIRRARKRAPTHTNALQLLKPSSELRIFLCLHGLDSVPASINFMEISRGISDPGLVIYVAEIIELTEHIASTMESGEGVQSNTIKDKAVIEMREQITNMFQAYIDTDGDGITLKRAMALSTINNMAQNICVLAENLMAALIILPFHRNQRQDGKFDTGNPGFRYVNRKLLKNSPCSVGILVNRGFGSIGKISRTEPSVKVAAIFIGGRDDREALCYVGRVAWHKGVHVTVIRFLVDTSAESSRLAAYRVTLPEQEQEMGLDDECFAQFYEQHIVGGRISYLEKHLANASETFSTLRSFEGEYSLVIVGREGGANSILTKGMNDWQQCPELGPIGDVLSGPDFSKSVSVLIIQQHKLRGELAGLDEDFTIM 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02941 864 Gene3D - 20 395 IPR038770 -
Viun11g02941 864 PANTHER CATION/H + ANTIPORTER 23 849 - -
Viun11g02941 864 Pfam Sodium/hydrogen exchanger family 25 385 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02941 Viun-Chr11 40982930 40986942 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02941 471 864 Antiporter Super Family AT3G52080 52.475 3.56e-135 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02941 K26731 - twl:120011899 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02941 11 40982930 40986942 Viun11g02941 11 40982930 40986942 ECH