Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02913 ATGGCTGATTCCACTCCAACTGCTACTCCTTCAAACGACACCCAATCATGCGTTTTCCTACGAACGGTCACTTTATATGATTGGTGGTTGATTAAAGCCACAAACGACTTCCAAGGAAAGCGTTTAGCCGTCGCAGGCATCTCATCGAGAAAGGATGAGGCGATGCGCGTGTTTGTTTCTGCTCCCGTTATCGAAAGATACGACGTGTTTTCTCTCATGACTGCGGATGGGATATACCTTATAATTAGTGGCTTCATCAACGAGCAGCGCACTATTGAAAACGGTTTCGACCCTCAGATTTTGAACCGGTTTTTATTTGGCTTCCCTCCAGACTGGAAAACCTGTGCTCTAGATTTCTCCAGAGAAGAATCAACCACTGCCAATGATTTGGGTAGTGGTTTTCTTGATGACGTACCAGCTAGCTGTTCAGAAATTTTATCTGATGTTGCAATCGCAGGTGTGGAAAATTGTACTCCTACTTTTTTGGCATCACCGGAGAAGGCGCAGGGTGATCAGGAAAAGGCATTCCCTGAAAATGAATGCAACGTGTCAAAGGAGGTGGCTGGTGTTAATGTTGCTTGTAGTAGAGGTAGGAAAAGACGAAGTGCCAGGTTGCATGATGTTAAAGTATACCAGCGGAAGAAACAGTCTGCTTCTGGATTGCCTCCAAAGAATCCAAATAATAAGAACCATATTTCAGAGGCGGCCTTGGATAATTGTGATGTAGTGGGACCAAAAAGTCCGGAAACACCTATTCAGTCACAATCATGGAGACAACTACGCACATCATCTGAACAGATAGTAAAAAAATCTGCATCCAGAATTTCTAGAACATTGTCACCAAAGACCGAAGGCTGTCAAAAGAAAAAAGTGGGCAGGCCTAAGGGAACACTGAATAAATCTGCTTCAGCTGGGAAAAATTCGCGATCAAGAGATCTAAGTCACTTGACCAAGGGAAGCCGACAGAAAAATTCCACTGTTTCTCCTGAGTCATCGAGTTTCAGAACATTGTCACCAGAGACCGAAGGCTGTCATAAGAAAAAAGTGGGCAGGCATAAGGGATCACTGAATAAATCTGCTTCAGCTGAGAAAAATTCGCGATCAAGAGATTTAAGTCACTTGACCAAGGAAAGCCGACAGAAAAATTCCATTGTTTCTCCTGAGTCATGGAGTTTCAGAACATCCAGATCTGGCAGATTGCTTGTTCGTCCCTTAGAATTTTGGCGCAATCAAATACCAATATATGATGCGGATCATGTGCTTAAAGAAATTAAGGATGGTGCATCTTTGATATCACCTTGA 1302 0.4332 MADSTPTATPSNDTQSCVFLRTVTLYDWWLIKATNDFQGKRLAVAGISSRKDEAMRVFVSAPVIERYDVFSLMTADGIYLIISGFINEQRTIENGFDPQILNRFLFGFPPDWKTCALDFSREESTTANDLGSGFLDDVPASCSEILSDVAIAGVENCTPTFLASPEKAQGDQEKAFPENECNVSKEVAGVNVACSRGRKRRSARLHDVKVYQRKKQSASGLPPKNPNNKNHISEAALDNCDVVGPKSPETPIQSQSWRQLRTSSEQIVKKSASRISRTLSPKTEGCQKKKVGRPKGTLNKSASAGKNSRSRDLSHLTKGSRQKNSTVSPESSSFRTLSPETEGCHKKKVGRHKGSLNKSASAEKNSRSRDLSHLTKESRQKNSIVSPESWSFRTSRSGRLLVRPLEFWRNQIPIYDADHVLKEIKDGASLISP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02913 433 MobiDBLite consensus disorder prediction 209 387 - -
Viun11g02913 433 MobiDBLite consensus disorder prediction 319 339 - -
Viun11g02913 433 MobiDBLite consensus disorder prediction 363 377 - -
Viun11g02913 433 MobiDBLite consensus disorder prediction 218 234 - -
Viun11g02913 433 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 3 427 - -
Viun11g02913 433 MobiDBLite consensus disorder prediction 248 282 - -
Viun11g02913 433 Pfam SANTA (SANT Associated) 23 114 IPR015216 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02913 Viun-Chr11 40842803 40847082 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun11g02913 SANTA 3.7e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02913 - - vun:114170070 867.455