Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02912 ATGGCTGATTCCACTCCAACTGCTACTCCTTCAAACGACACCCAATCATGCGTTTTCCTACGAACGGTCACTTTATATGATTGGTGGTTGATTAAAGCCACAAACGACTTCCAAGGAAAGCGTTTAGCCGTCGCAGGCATCTCATCGAGAAAGGATGAGGCGATGCGCGTGTTTGTTTCTGCTCCCGTTATCGAAAGATACGACGTGTTTTCTCTCATGACTGCGGATGGGATATACCTTATAATTAGTGGCTTCATCAACGAGCAGCGCACTATTGAAAACGGTTTCGACCCTCAGATTTTGAACCGGTTTTTATTTGGCTTCCCTCCAGACTGGAAAACCTGTGCTCTAGATTTCTCCAGAGAAGAATCAACCACTGCCAATGATTTGGGTAGTGGTTTTCTTGATGACGTACCAGCTAGCTGTTCAGAAATTTTATCTGATGTTGCAATCGCAGGTGTGGAAAATTGTACTCCTACTTTTTTGGCATCACCGGAGAAGGCGCAGGGTGATCAGGAAAAGGCATTCCCTGAAAATGAATGCAACGTGTCAAAGGAGGTGGCTGGTGTTAATGTTGCTTGTAGTAGAGGTAGGAAAAGACGAAGTGCCAGGTTGCATGATGTTAAAGTATACCAGCGGAAGAAACAGTCTGCTTCTGGATTGCCTCCAAAGAATCCAAATAATAAGAACCATATTTCAGAGGCGGCCTTGGATAATTGTGATGTAGTGGGACCAAAAAGTCCGGAAACACCTATTCAGTCACAATCATGGAGACAACTACGCACATCATCTGAACAGATAGTAAAAAAATCTGCATCCAGAATTTCTAGAACATTGTCACCAAAGACCGAAGGCTGTCAAAAGAAAAAAGTGGGCAGGCCTAAGGGAACACTGAATAAATCTGCTTCAGCTGGGAAAAATTCGCGATCAAGAGATCTAAGTCACTTGACCAAGGGAAGCCGACAGAAAAATTCCACTGTTTCTCCTGAGTCATCGAGTTTCAGAACATTGTCACCAGAGACCGAAGGCTGTCATAAGAAAAAAGTGGGCAGGCATAAGGGATCACTGAATAAATCTGCTTCAGCTGAGAAAAATTCGCGATCAAGAGATTTAAGTCACTTGACCAAGGAAAGCCGACAGAAAAATTCCATTGTTTCTCCTGAGTCATGGAGTTTCAGAACATCCAGATCTGGCAGATTGCTTGTTCGTCCCTTAGAATTTTGGCGCAATCAAATACCAATATATGATGCGGATCATGTGCTTAAAGAAATTAAGGATGGTGCATCTTTGATATCACCTTGTAAGGTTTCTTCATCATCATCGAGTAGGAAGGACTGA 1338 0.4327 MADSTPTATPSNDTQSCVFLRTVTLYDWWLIKATNDFQGKRLAVAGISSRKDEAMRVFVSAPVIERYDVFSLMTADGIYLIISGFINEQRTIENGFDPQILNRFLFGFPPDWKTCALDFSREESTTANDLGSGFLDDVPASCSEILSDVAIAGVENCTPTFLASPEKAQGDQEKAFPENECNVSKEVAGVNVACSRGRKRRSARLHDVKVYQRKKQSASGLPPKNPNNKNHISEAALDNCDVVGPKSPETPIQSQSWRQLRTSSEQIVKKSASRISRTLSPKTEGCQKKKVGRPKGTLNKSASAGKNSRSRDLSHLTKGSRQKNSTVSPESSSFRTLSPETEGCHKKKVGRHKGSLNKSASAEKNSRSRDLSHLTKESRQKNSIVSPESWSFRTSRSGRLLVRPLEFWRNQIPIYDADHVLKEIKDGASLISPCKVSSSSSSRKD 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02912 445 MobiDBLite consensus disorder prediction 218 234 - -
Viun11g02912 445 MobiDBLite consensus disorder prediction 363 377 - -
Viun11g02912 445 MobiDBLite consensus disorder prediction 319 339 - -
Viun11g02912 445 MobiDBLite consensus disorder prediction 248 282 - -
Viun11g02912 445 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 3 427 - -
Viun11g02912 445 MobiDBLite consensus disorder prediction 209 388 - -
Viun11g02912 445 Pfam SANTA (SANT Associated) 23 114 IPR015216 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02912 Viun-Chr11 40842803 40847159 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun11g02912 SANTA 3.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02912 - - vun:114170070 874.389