Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02911 ATGGCTGATTCCACTCCAACTGCTACTCCTTCAAACGACACCCAATCATGCGTTTTCCTACGAACGGTCACTTTATATGATTGGTGGTTGATTAAAGCCACAAACGACTTCCAAGGAAAGCGTTTAGCCGTCGCAGGCATCTCATCGAGAAAGGATGAGGCGATGCGCGTGTTTGTTTCTGCTCCCGTTATCGAAAGATACGACGTGTTTTCTCTCATGACTGCGGATGGGATATACCTTATAATTAGTGGCTTCATCAACGAGCAGCGCACTATTGAAAACGGTTTCGACCCTCAGATTTTGAACCGGTTTTTATTTGGCTTCCCTCCAGACTGGAAAACCTGTGCTCTAGATTTCTCCAGAGAAGAATCAACCACTGCCAATGATTTGGGTAGTGGTTTTCTTGATGACGTACCAGCTAGCTGTTCAGAAATTTTATCTGATGGTGTGGAAAATTGTACTCCTACTTTTTTGGCATCACCGGAGAAGGCGCAGGGTGATCAGGAAAAGGCATTCCCTGAAAATGAATGCAACGTGTCAAAGGAGGTGGCTGGTGTTAATGTTGCTTGTAGTAGAGGTAGGAAAAGACGAAGTGCCAGGTTGCATGATGTTAAAGTATACCAGCGGAAGAAACAGTCTGCTTCTGGATTGCCTCCAAAGAATCCAAATAATAAGAACCATATTTCAGAGGCGGCCTTGGATAATTGTGATGTAGTGGGACCAAAAAGTCCGGAAACACCTATTCAGTCACAATCATGGAGACAACTACGCACATCATCTGAACAGATAGTAAAAAAATCTGCATCCAGAATTTCTAGAACATTGTCACCAAAGACCGAAGGCTGTCAAAAGAAAAAAGTGGGCAGGCCTAAGGGAACACTGAATAAATCTGCTTCAGCTGGGAAAAATTCGCGATCAAGAGATCTAAGTCACTTGACCAAGGGAAGCCGACAGAAAAATTCCACTGTTTCTCCTGAGTCATCGAGTTTCAGAACATTGTCACCAGAGACCGAAGGCTGTCATAAGAAAAAAGTGGGCAGGCATAAGGGATCACTGAATAAATCTGCTTCAGCTGAGAAAAATTCGCGATCAAGAGATTTAAGTCACTTGACCAAGGAAAGCCGACAGAAAAATTCCATTGTTTCTCCTGAGTCATGGAGTTTCAGAACATCCAGATCTGGCAGATTGCTTGTTCGTCCCTTAGAATTTTGGCGCAATCAAATACCAATATATGATGCGGATCATGTGCTTAAAGAAATTAAGGATGGTGCATCTTTGATATCACCTTGTAAGGTTTCTTCATCATCATCGAGAAGGACTGACTTTGATTGA 1332 0.4309 MADSTPTATPSNDTQSCVFLRTVTLYDWWLIKATNDFQGKRLAVAGISSRKDEAMRVFVSAPVIERYDVFSLMTADGIYLIISGFINEQRTIENGFDPQILNRFLFGFPPDWKTCALDFSREESTTANDLGSGFLDDVPASCSEILSDGVENCTPTFLASPEKAQGDQEKAFPENECNVSKEVAGVNVACSRGRKRRSARLHDVKVYQRKKQSASGLPPKNPNNKNHISEAALDNCDVVGPKSPETPIQSQSWRQLRTSSEQIVKKSASRISRTLSPKTEGCQKKKVGRPKGTLNKSASAGKNSRSRDLSHLTKGSRQKNSTVSPESSSFRTLSPETEGCHKKKVGRHKGSLNKSASAEKNSRSRDLSHLTKESRQKNSIVSPESWSFRTSRSGRLLVRPLEFWRNQIPIYDADHVLKEIKDGASLISPCKVSSSSSRRTDFD 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02911 443 Pfam SANTA (SANT Associated) 23 114 IPR015216 -
Viun11g02911 443 MobiDBLite consensus disorder prediction 315 335 - -
Viun11g02911 443 MobiDBLite consensus disorder prediction 359 373 - -
Viun11g02911 443 MobiDBLite consensus disorder prediction 214 230 - -
Viun11g02911 443 MobiDBLite consensus disorder prediction 244 278 - -
Viun11g02911 443 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 3 423 - -
Viun11g02911 443 MobiDBLite consensus disorder prediction 205 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02911 Viun-Chr11 40842803 40847272 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun11g02911 SANTA 3.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02911 - - vun:114170070 870.537