Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02891 ATGGAGGAATCGTGCGCTCTGTGCAAGAAGAGGGCGGCGATGGTGTGCGACTCCGACGAGGCAAAGCTGTGCTGGGAGTGCGACGACAAAGTTCACAGCGCGAATTTCTTGGTGGCGAAGCATTCGCGTGTGCTTCTGTGTCGTTCCTGCCATTCCCCCACTCCGTGGAAAGCCTCCGGCACCAAACTCACGCCCACCGTCTCCTTCTGTCAACCTTGTGTCGCCGATCGTCATACCAGGTTGCACCGCTTGGTGAACGATGTTCGGCAACAACAGAAAGAAGAGGAGAATGAAGCGCTTCCACCGTCCTCTGCTTCCGCCACGTCACCACCCCGTGCCGCCGCTTTACCGTTCAAGCTATTAAGAAACAACTCTTTCTCCATCGATTCCATCGATTCCCATGACGGGACAGCGTGTTCTTCCTCAGAGATGCTACCCAGGGCAGTAGGGAAGGATGAAAAGATGGTGAAGGGTTGTGTTAGTGAGTATAAGTAG 495 0.5475 MEESCALCKKRAAMVCDSDEAKLCWECDDKVHSANFLVAKHSRVLLCRSCHSPTPWKASGTKLTPTVSFCQPCVADRHTRLHRLVNDVRQQQKEEENEALPPSSASATSPPRAAALPFKLLRNNSFSIDSIDSHDGTACSSSEMLPRAVGKDEKMVKGCVSEYK 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02891 164 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 98 - -
Viun11g02891 164 MobiDBLite consensus disorder prediction 90 111 - -
Viun11g02891 164 SMART bboxneu5 1 46 IPR000315 GO:0008270
Viun11g02891 164 Pfam B-box zinc finger 4 45 IPR000315 GO:0008270
Viun11g02891 164 CDD Bbox1_BBX-like 5 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02891 Viun-Chr11 40762541 40763508 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02891 1 93 C2C2-CO-like Transcription Factor Family AT4G27310 52.083 1.92e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun11g02891 zf-B_box 3.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02891 - - gmx:100818267 190.274