Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun11g02871 | ATGGCAGACACTGTAGTTTCCTTCGTTTTGGATCACTTAGCGCAGCTTGTGGCACGCGAAGCTAACTTGCTGTATGGCGTGGAGGACAGGGTCCAGTCCCTCCAGTACGAACTTCAAATGATCAAACAACTCCTCAATACCACAAAGAGAAAGAAGGGAATGGAACATACAGTGTTGAACCAAATCAGAGATATGGCCCACTTAGCTGAGGATGTCATCGACACATTCGTAGCCAAAGTTTCCATTTACAAGAGGAGAACCATTCTGGGGAAGATGCTCCGTGGCTTTCACCAAGCAAGGTTGCTCCGCGACGTGGCCGAAAAAGTAGACAATATCAAAATCACTCTCAACGAAATACGCGATAACAAGAGCAAATATGAGGCTTTCAAAGAAACCAATAATCAATCTGCAGCAGAAGAAGAGGAAGAGGAGGAGAAGGAAAGAGCAAAAGCTCTGCAGAAGCTAAGAAGAAATGTGGAGGAAGATGACGTGGTTGGCTTTGTTCATGACTCCAACGATGTCATCAAGCGACTACTGGAAGGTGGTTCAAACCGTAAAGCTGTCTCTATCATTGGCATGGGGGGATTGGGGAAAACCACCCTTGCCCGAAAAGTCTATAATAGCAGCCAGGTGACGCAACACTTCATGTGTCGCGCGTGGGTTTATATGTCAAATGAGTGTAGAGTTAGGGAGCTTTTGCTTGGCCTTCTTAAGCATTTGATGCCAGATTTTGAACAGCAATGCAGAGGCAACAAGAAAGGTAAGAAAAGCGCTGGAAACATTAGCAACCTGAGTGAGGAGGAGCTGAAGATACTGGTGCGGAACTGTTTGGAGAGTGAAAGATATCTTGTGGTGGTAGATGATCTGTGGAAAAAGCAAGATTGGGACGAGGTGCAAGATGCTTTTCCGGACAACAACAGAGGCAGCAGAATCTTGATCACCAGTCGTTTGAAAGAGGTGGCCTTGCATGCTGCCCATGATGTTCCTCACTATCTTCAATTCCTCAATGAAGAAGAAAGTTGGAAGTTGTTTAGTAGGAGAGTGTTTAGGGGTGAAGACTACCCTTCTGATTTGGAGTCTCTCGGAAAGCAGATGGTTCAAAGTTGTCGTGGCTTGCCTCTCTCCATCACTGTCTTAGCAGGGATGCTGGCCAACAAGGAAAAGTCATATAGAGAATGGTCTAAAGTGGTGGGTCATGTTAACTCGTATCTCACTCAAGATGAGACCCAAGTGAAAGATATAGTTCTCAAACTCAGCTATGATAACCTGCCAAGGAGATTAAAACCATGTTTTCTCTATCTTGGGATATTTCCTGAAGACTTTGAAATCCCTGTTGTGCCATTATTGCAAAAATGGGTTGCGGAAGGTTTTATACAAGATAAAGGAAATAGAGACCCTGATGACATTGCAGAAGATTACTTGTATGAGCTTATTGATCGTAGTTTGGTACAAGTAGCAATTGTGGATACTAATGGAAGTGTGAAGACGTGTCAGGTTCATGATCTTCTTCGGGATCTTTGCATATCAGAGAGCAAAGAGGACAAAGTTTTTGAAGTTTGCACAGACAATAACATTCTAATCCCTACAAAACCACGCAGGCTGTCCATTCACAGTAGCATGGGTCACTACATTTCTTCAAACGGTAATGACCACTCTTGTATCCGTTCCCTGTTCTTCTTTGGCCCAGATTACCATGTTCACATGAAGGAGTGGAAATGGCTTTCAGAAGGCTTCAAATTGGTTCGGGTTTTAGAGATTGGACCAACCAGGTGGGGAAAAATCCCTTCAAATTTAGGGAACTTTATCCATTTAAGGTACTTAAGAATGAACTCATTCAATGTTAAATTTGTTCCAACTTCAATACTTACCCTTTGGAATCTACAAACCATAGACATAGGTCCTTGGAGGCGTAGTGTTCCAATTTCTTTCCCTGTCCAAATGTGGAAACTCAAACATTTAAGACATTTGAATACACCACAACCTATCGAGCTGCGAGGCAGTTATTCAGGATCAGACGAGAAGATGTGGAATCTTCAAACCATCTCTGCCATTCTACTCAATAGCCAAGCAACATCTCTGATAAAGAAGGGAACATTCCCCAATCTTAAAAGTCTAGGATTGAAAGTGGCTTATGGATACAAAGGTGAATTACCCAAATTGTTGCAGAGCCTACAACAATTAAGTTATTTGAATAAGTTGGTGATTGTTCTCCGAGATAGGCATGATACAGAAGTATTTGTCGATGAAAGTGTGGAAAGGAATAATGGTTGCAAGCCGCAAGAGTTGTTACGATGCCTAGGGCAATTCAATTGTCTAACTATCTTAAGCATCGAGAATTGTTTGGACCTTCTAACATGTGCGGTCACACTCCCTCCGAACGTTACAGAGTTAACATTGTCAGGGATTGACTACATTAGTGATCAAGGGATGAATGGTTTGGGAAATCACACTAAACTCAAAATTTTGACACTTTGGGGAATTTGGTCGTGTGATACCTTTAACCTTAATTGTGTCGGAGGTAGCTTCCCACAACTCGAAGTGTTTCAAATGGGTCATTTAGAAGTTGGAAATTGGAGATTAGGTAATGGTGCAATGCCGAAGCTCCAGAAAGTGGTCATCTTCAATTGTGATAGGTTAAATGATCTCCCAAATGAACTGTGGTCTTTGAGTGGCTTGAGAAAAGTGCAGGTAAGGAAACCTTCAGAACAAATGGCTTGCATGTTGCGGAATTTGGAAGTAAACAATGGGGTTCAACTCTTTATAAATGGCATCAATATCAACAATTTTTAG | 2790 | 0.4233 | MADTVVSFVLDHLAQLVAREANLLYGVEDRVQSLQYELQMIKQLLNTTKRKKGMEHTVLNQIRDMAHLAEDVIDTFVAKVSIYKRRTILGKMLRGFHQARLLRDVAEKVDNIKITLNEIRDNKSKYEAFKETNNQSAAEEEEEEEKERAKALQKLRRNVEEDDVVGFVHDSNDVIKRLLEGGSNRKAVSIIGMGGLGKTTLARKVYNSSQVTQHFMCRAWVYMSNECRVRELLLGLLKHLMPDFEQQCRGNKKGKKSAGNISNLSEEELKILVRNCLESERYLVVVDDLWKKQDWDEVQDAFPDNNRGSRILITSRLKEVALHAAHDVPHYLQFLNEEESWKLFSRRVFRGEDYPSDLESLGKQMVQSCRGLPLSITVLAGMLANKEKSYREWSKVVGHVNSYLTQDETQVKDIVLKLSYDNLPRRLKPCFLYLGIFPEDFEIPVVPLLQKWVAEGFIQDKGNRDPDDIAEDYLYELIDRSLVQVAIVDTNGSVKTCQVHDLLRDLCISESKEDKVFEVCTDNNILIPTKPRRLSIHSSMGHYISSNGNDHSCIRSLFFFGPDYHVHMKEWKWLSEGFKLVRVLEIGPTRWGKIPSNLGNFIHLRYLRMNSFNVKFVPTSILTLWNLQTIDIGPWRRSVPISFPVQMWKLKHLRHLNTPQPIELRGSYSGSDEKMWNLQTISAILLNSQATSLIKKGTFPNLKSLGLKVAYGYKGELPKLLQSLQQLSYLNKLVIVLRDRHDTEVFVDESVERNNGCKPQELLRCLGQFNCLTILSIENCLDLLTCAVTLPPNVTELTLSGIDYISDQGMNGLGNHTKLKILTLWGIWSCDTFNLNCVGGSFPQLEVFQMGHLEVGNWRLGNGAMPKLQKVVIFNCDRLNDLPNELWSLSGLRKVQVRKPSEQMACMLRNLEVNNGVQLFINGININNF | 929 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun11g02871 | 929 | CDD | RX-CC_like | 2 | 121 | IPR038005 | - | |
Viun11g02871 | 929 | FunFam | Probable disease resistance protein At1g61300 | 146 | 329 | - | - | |
Viun11g02871 | 929 | Gene3D | Ribonuclease Inhibitor | 546 | 916 | IPR032675 | - | |
Viun11g02871 | 929 | Coils | Coil | 126 | 162 | - | - | |
Viun11g02871 | 929 | Pfam | NB-ARC domain | 172 | 422 | IPR002182 | GO:0043531 | |
Viun11g02871 | 929 | SUPERFAMILY | L domain-like | 498 | 911 | - | - | |
Viun11g02871 | 929 | Gene3D | - | 5 | 96 | - | - | |
Viun11g02871 | 929 | Gene3D | - | 334 | 419 | IPR042197 | - | |
Viun11g02871 | 929 | PANTHER | DISEASE RESISTANCE PROTEIN RP | 32 | 860 | IPR044974 | GO:0006952 | |
Viun11g02871 | 929 | FunFam | Probable disease resistance protein At5g66910 | 334 | 421 | - | - | |
Viun11g02871 | 929 | Gene3D | - | 147 | 328 | IPR027417 | - | |
Viun11g02871 | 929 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 153 | 434 | IPR027417 | - | |
Viun11g02871 | 929 | Coils | Coil | 102 | 122 | - | - | |
Viun11g02871 | 929 | PRINTS | Disease resistance protein signature | 369 | 383 | - | - | |
Viun11g02871 | 929 | PRINTS | Disease resistance protein signature | 276 | 290 | - | - | |
Viun11g02871 | 929 | PRINTS | Disease resistance protein signature | 187 | 202 | - | - | |
Viun11g02871 | 929 | PRINTS | Disease resistance protein signature | 767 | 783 | - | - | |
Viun11g02871 | 929 | FunFam | Probable disease resistance protein At1g63360 | 420 | 509 | - | - | |
Viun11g02871 | 929 | Gene3D | - | 420 | 510 | IPR036388 | - | |
Viun11g02871 | 929 | Pfam | Rx N-terminal domain | 5 | 81 | IPR041118 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun11g02871 | Viun-Chr11 | 40627241 | 40630291 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun11g02871 | 186 | 437 | WRKY Transcription Factor Family | AT5G45050 | 26.562 | 4.49e-08 | 55.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun11g02871 | - | - | vra:106779070 | 1272.3 |