Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02865 ATGGAAGAGAGTGTAGTTTCCTTTGTTTTAGATCACTTAGCCCAGCTTGTGGCACGCGAAGCTAACTTGCTGTATGGCGTGGAGGACAGGGTCCAGTCCCTCCAGTACGAACTTCAAATGATCAAAGAGCTGCTCAGTAGCACAAGGAGCAAGAAGGGAATGGAACATACAGTGTTGAACCAAATCAGAGATGTGTCCCACTTAGCTGAGGATGTCATCGACACATTCGTAGCCAAAGTTTCCATTTACAAGAGAAGAACCATTCTGGGGAGGATGCTCCGTGGCTTTGGCCAATTAAGGTTGCTCCACCGCGTAGCCGACAAAATAGACAAGATCAAAACCACTCTCAACGAAATACGCGACAACAAGGACAAATATGATGCTTTCAAAGAAACCAAGAATCAATCCGCAGCAGAAGAGGAGGAGGAGGAGAAAAGGGCGCAGTCAGTGCAGAAGCTAAGAAGAAATGTGGAGGAGGAAGATGTGGTTGGCTTTGTCCATGACTCCAAGGATATCATCAAGCGACTCCTGGAAGGTGGTTCAAATCGTAAAGCTGTGTCTATCGTTGGCATGGGAGGATTGGGGAAGACCACTCTTGCCCGAAAGGTTTATAACAGCAGCCAGGTGAAGCAACGCTTCATGTGTCGGGCGTGGGTTTATGTGTCAAACGAGTGCAGAGCTAAGGAGCTTTTAATTGGCCTTCTTAAGCATTTGATGCCAAATTTTGAACAGCAAGGCAGAGGAAAGAAAAAAGGTAAGAAAAGCGCAGGAGACATTAACGAGCTTAGTGAGGAGGAGCTGAAGAAATTGGTGCGGAACTGCTTGGAGTGGAAAAGGTATCTTGTGGTGGTAGATGACCTGTGGAAAAAGCAAGATTGGGATGAGGTGCAAGATGCTTTTCCGGACAACAACAGAGGCAGCAGAATATTGATCACAAGTCGTTTGAAAGAGGTGGCCTTGCATGCTACCCATGATGTTCCTCACTATCTTCAATTCCTCAATGAAAAAGAAAGTTGGGAGTTGTTTCACAGGAAAGTGTTTAGGGGTGAAGACTACCCTTCTGATTTGGAGTCTCTGGGAAAGCAGATGGTTAAAAGTTGTCGTGGTTTGCCACTCTCCATCATTGTCTTAGCAGGGTTGCTGGCCAACAAGGAAAAGTCACATAGAGAATGGTCTAAAGTGGTGGGTCATGTTAATTGGTATCTTACTCAGGACGAGACCCAAGTGAAGGATATAGTTCTGAAACTCAGCTATGACAATTTACCAAGGAGACTAAAACCATGTTTTCTCTATCTTGGGTTGTTTCCTGAAGACTTTGAAATACCTGTTACGCCATTATTGCAAAAATGGGTTGCTGAGGGTTTTATACAAGATACAGGGAGCAGAGACCCAGATGATGTTGCAGAAGACTACTTGTACGAGCTCATTGATCGTAGTTTGGTCCAAGTAGCAAAAGTGGATACTAATGCAAGTGCAGAGACGTGTCGGGTTCATGATCTTCTTCGAGATCTTTGCATATTAGAGAGCAAGGAGGACAGAGTTTTTGAAGTTTGCACAGACCATAATATTCTAATTCCAACAAAACCTCGCAGACTATCTATTCACAGTAAGATGGATCACTACATTTCTTCAAGCAACAATGATCATTCATGTGTTCGTTCCATGTTCTTCTTTGGCTCAATTTACTATGTTCGCAGTTGGGACTGGAAATGGCTTTTTGAAAGTTTGAAATTGGTTCGAGTGTTGGAGTTTGGAGTAAACGGCTCTAATAAGATCCCTTCCGATATAGGGAACTTTATCCATTTAAGGTACCTTAGAATAGATATAGAGTATGTTATGTTTGTTCCAGATTCGATACTTAACCTTTGGAATTTACAAACCATAGACCTAGGTCCTCCGAGGCGTAATGTTCCAATTTCTTTCCCTGCCAAAATATGGAAACTAAAACATTTAAGGCATTTGAATACACTACGGGCTATCGAGCTGCGAGGCAGTTGTTCAGGATCAGATGTGAAAATGTGGAATGTTCAAACCGTCTCTTCCCTAGTAATCAATAGCCAAGCAACATCTCTGATAAAAAAAGGAACTTTCCCCAATGTTAAGAGGCTAGGGTTGAGAGTGACTTCTGAATCCGAAGGTGAATTACCCAAATTGTTGCAGAGCTTACAGCAATTAAGCTATTTGAACAAGTTAGTGATTGTCCTCCGAGATAGAGATGATGCAGGTGCAGAGCACTCAACCGATGAAAGTGTGAAAAGGAACAGTGGTTTCAAGCCACAAGAATTGTTACGAAACCTAGGACAATTCAATTGTCTAACTATCTTAACCATTGAGAATGCTTTCGACCTTCTAACCTATGCGCTCACATTCCCTCCAAACGTTACAGAGTTAACGTTGTCAGAGATTAACTGCATAAGTGATGAGGGGATGAATGGTTTGGGAAATCACACCAAACTAAAAAAATTGAGACTTTTAGGAGATGTAACCTGGTCTGGGGAATCCTTTGACTTGAATTGTGTTGAAGGTGGCTTCTCGCAATTGGAAGTGATTGAAATGGAAGATTTGAAAGTTGGAAAGTGGAAATTAGGCAATGGTGGAATGTTGAGGCTTCATAGTGTGATGATTCAGAATTGTGCAAGGTTAGATGATTTACCAAATGAAATATGGTCATTGAGTAGTTTGAGAAAAGTGCAGGTAATGAAACCCTCAGAAGAAATGGCTCGCATGCTAAGGAATTTGGAAATAAAGAATGGGGTTCAACTTGTCACAGAAGATCATCAATCTCGGACAGATTGGACAGATTTCAATATTTTGGATTGTATTAGTGAGATCTAA 2835 0.4219 MEESVVSFVLDHLAQLVAREANLLYGVEDRVQSLQYELQMIKELLSSTRSKKGMEHTVLNQIRDVSHLAEDVIDTFVAKVSIYKRRTILGRMLRGFGQLRLLHRVADKIDKIKTTLNEIRDNKDKYDAFKETKNQSAAEEEEEEKRAQSVQKLRRNVEEEDVVGFVHDSKDIIKRLLEGGSNRKAVSIVGMGGLGKTTLARKVYNSSQVKQRFMCRAWVYVSNECRAKELLIGLLKHLMPNFEQQGRGKKKGKKSAGDINELSEEELKKLVRNCLEWKRYLVVVDDLWKKQDWDEVQDAFPDNNRGSRILITSRLKEVALHATHDVPHYLQFLNEKESWELFHRKVFRGEDYPSDLESLGKQMVKSCRGLPLSIIVLAGLLANKEKSHREWSKVVGHVNWYLTQDETQVKDIVLKLSYDNLPRRLKPCFLYLGLFPEDFEIPVTPLLQKWVAEGFIQDTGSRDPDDVAEDYLYELIDRSLVQVAKVDTNASAETCRVHDLLRDLCILESKEDRVFEVCTDHNILIPTKPRRLSIHSKMDHYISSSNNDHSCVRSMFFFGSIYYVRSWDWKWLFESLKLVRVLEFGVNGSNKIPSDIGNFIHLRYLRIDIEYVMFVPDSILNLWNLQTIDLGPPRRNVPISFPAKIWKLKHLRHLNTLRAIELRGSCSGSDVKMWNVQTVSSLVINSQATSLIKKGTFPNVKRLGLRVTSESEGELPKLLQSLQQLSYLNKLVIVLRDRDDAGAEHSTDESVKRNSGFKPQELLRNLGQFNCLTILTIENAFDLLTYALTFPPNVTELTLSEINCISDEGMNGLGNHTKLKKLRLLGDVTWSGESFDLNCVEGGFSQLEVIEMEDLKVGKWKLGNGGMLRLHSVMIQNCARLDDLPNEIWSLSSLRKVQVMKPSEEMARMLRNLEIKNGVQLVTEDHQSRTDWTDFNILDCISEI 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02865 944 FunFam Probable disease resistance protein At5g66910 332 419 - -
Viun11g02865 944 Pfam NB-ARC domain 170 420 IPR002182 GO:0043531
Viun11g02865 944 Gene3D - 142 327 IPR027417 -
Viun11g02865 944 Coils Coil 140 160 - -
Viun11g02865 944 FunFam Probable disease resistance protein At1g61300 144 327 - -
Viun11g02865 944 FunFam Probable disease resistance protein At1g63360 418 507 - -
Viun11g02865 944 Gene3D - 5 98 - -
Viun11g02865 944 Gene3D Ribonuclease Inhibitor 545 927 IPR032675 -
Viun11g02865 944 Gene3D - 418 507 IPR036388 -
Viun11g02865 944 SUPERFAMILY L domain-like 496 899 - -
Viun11g02865 944 Pfam Rx N-terminal domain 5 81 IPR041118 -
Viun11g02865 944 CDD RX-CC_like 3 121 IPR038005 -
Viun11g02865 944 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 432 IPR027417 -
Viun11g02865 944 Coils Coil 102 122 - -
Viun11g02865 944 Gene3D - 332 417 IPR042197 -
Viun11g02865 944 PANTHER DISEASE RESISTANCE PROTEIN RP 33 855 IPR044974 GO:0006952
Viun11g02865 944 PRINTS Disease resistance protein signature 185 200 - -
Viun11g02865 944 PRINTS Disease resistance protein signature 274 288 - -
Viun11g02865 944 PRINTS Disease resistance protein signature 652 668 - -
Viun11g02865 944 PRINTS Disease resistance protein signature 367 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02865 Viun-Chr11 40594685 40597990 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02865 184 504 WRKY Transcription Factor Family AT5G45050 25.926 1.51e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02865 - - vra:106779070 1264.21