Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02829 ATGGCACCTTCTCGGTGTGTTACCGATTCGATGCCTCCGTCAACAGCAACGCCCGAAGTTGAAGAGAATGATTTTCGGCCATTCTTTGTTCTTCATAAAGCTTCATCACGGAGAAAAGATAGAACACCAACTGCACAGACAAAATTGTGCAAGACAAATGAATTATCTTCATCACCGCAGAGTGTAAAGAAGTTGGGAGGAAGTATTACGGAGGAATGTGATCTCCATTTGTTTCAGCAACTACAAATTGAAGCTTTTGACACTGTTTGGGCCAAGATTGAATCTACCATTAAGGATGTTTTAAGAGATCTCAATGCCAGTGTATTTAATAATATACAACAATGGGTCCTGGAGTGCTTCAACACTACTAAGTTGCTAGGACAACATACTATAGCTGAAGCAACTCGGTCTTTTCCTGTTCTTAATAATACTACTCCTGGGCAGCTGTTCACTGCTTTTGTTGTCACCAGAAACATAGAGTTCGTTGATGATATATTGACATTTGAAGAACTTGGCCATTTCTTGAAATCCCATGGATGCCATGTGGCTAAGCTTTCATCACTAGAGTTTTCATTGAAAAATGGGATTGCTGGTTGCTTGAAAGCTCTATTGCGAGAGTTTGTAGGATGTGTTATTGATTCAGCTGATATATCAATCTTAGCATCATGGTATAGAGAACAAGTAAACTACAATAAACCACTGGTGCTGATCATTAATGACCTGGGGAGATGTTCTGGATCAGTCTTAACTGATTTTATCTTGATGCTGAGTGAATGGATTATCAAGGTGCCAATTATCTTCATATTTGGAGTTGCAACGACAGTGGATACCCCGAGAAACATTCTGCCATCACATGCTCTTGAGCGTTTGTGTCCCTCTAGTTTTATGCTTGGAACACCAGCTGAGAGAATGGATGCAGTTGTTGAGGCTGTTCTTGTGAAACATTGTTCCATGTTTAGTATTGGTCATAAAGTGGCAGTCTTCCTAAGGAACTACTTCATCAACCAGGATGGGACAATAACATCCTTTATTAGAGCTTTGAAGGTAGCTTGCTTATTGCATTTCTCAATGGAACCTCTAAGTCTCATAAATGGGCGAGCACTGGCTGGAGATCAGAAGGAGGGTAAATTTGCAGTATCACCTGAGACACTGCTGAAATACATAGATGAACTTCCATTGTATGCAAGGAATCAAATTGCTGATCATCACACCAAAAGGAGCACGGCTGAGGGTTTGTCAGAATTGGTGACGACACAGAAACTATGGAGTACTGCAGTTCTGTGCCTATATGAAGCTGGAAAATATAGGAGAGTGCGACTACTGGATTTGTTTTGTGAAGCTCTAAGTCAAGATTTGTACCTGTCAAGGGGTCCTGATTATCATGTGGGGAATGAAAGATATTGTGGTTTGTCTTCCACAAGTGATCCCTGTCAACAATATTCCATCATGCAAAGCGGTGGTTATATTGGCCAGATAGCACGAAATGTGAGGGATCTCCCCGCAGGGATGCTATATCAGCTGATTGAGAATTGGGAAAAACTTACTGCAGATATTTCAGAGATTCACGACAAACTGAAAGTGTTGCAATCTTCAGTAAGATGTGAAGATGGAAAGAGTCCACGCAAGAGTTCCAAGGACAATCCCAAGAAATATGCGTCCAGGATTTCAGTAAACACTGATAAGGATGCGAGAATGACAAATTCACAAGCTATCGCATTTTTAGACTATCTAGTTGGGAATTTTTTGAAGCCCATTGAAGGCATGCCTTTCCACGAAATTTTATGTTTCAAGAATGTTGAAAAGCTTCAATTGGTTTTGATTGGAGATCCAAGAAGAAGAATTCAGGTTGATCTGTTGGAGTTCCATAAGATTTTAAGGTGTGGCTGCTGTAGCAAGAATGGCAATGCCCTATTGCCATCCAGGCATGATTCCTCAATTATGTATTCTCTGGCTCAAGAGCATGGAGATCTTATCAATCTCCATGACTGGTTTCAGTCTTTTAGAACAATTGTTCTTCAAAATAAAAATAAACGGAAGCAAAATTCAAAGCAATCCCCCCAACCAAAGAAGAGAAAAGCTATAAATGGATCTGTAGACCAAAACGAAGCGTCAATTCAAGCACGCTTTTGTAAGGCAGTTACAGAGCTGCAGATCACAGGACTGGTTAGAATGCCCAGCAAGAGACGCCCAGATTTTGCGCAAAGAATAGCTTTTGGACTTTGA 2223 0.4071 MAPSRCVTDSMPPSTATPEVEENDFRPFFVLHKASSRRKDRTPTAQTKLCKTNELSSSPQSVKKLGGSITEECDLHLFQQLQIEAFDTVWAKIESTIKDVLRDLNASVFNNIQQWVLECFNTTKLLGQHTIAEATRSFPVLNNTTPGQLFTAFVVTRNIEFVDDILTFEELGHFLKSHGCHVAKLSSLEFSLKNGIAGCLKALLREFVGCVIDSADISILASWYREQVNYNKPLVLIINDLGRCSGSVLTDFILMLSEWIIKVPIIFIFGVATTVDTPRNILPSHALERLCPSSFMLGTPAERMDAVVEAVLVKHCSMFSIGHKVAVFLRNYFINQDGTITSFIRALKVACLLHFSMEPLSLINGRALAGDQKEGKFAVSPETLLKYIDELPLYARNQIADHHTKRSTAEGLSELVTTQKLWSTAVLCLYEAGKYRRVRLLDLFCEALSQDLYLSRGPDYHVGNERYCGLSSTSDPCQQYSIMQSGGYIGQIARNVRDLPAGMLYQLIENWEKLTADISEIHDKLKVLQSSVRCEDGKSPRKSSKDNPKKYASRISVNTDKDARMTNSQAIAFLDYLVGNFLKPIEGMPFHEILCFKNVEKLQLVLIGDPRRRIQVDLLEFHKILRCGCCSKNGNALLPSRHDSSIMYSLAQEHGDLINLHDWFQSFRTIVLQNKNKRKQNSKQSPQPKKRKAINGSVDQNEASIQARFCKAVTELQITGLVRMPSKRRPDFAQRIAFGL 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02829 740 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 79 208 IPR045667 -
Viun11g02829 740 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 227 362 IPR045667 -
Viun11g02829 740 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 21 739 IPR020795 GO:0003677|GO:0005664|GO:0006260
Viun11g02829 740 CDD Orc3 84 363 - -
Viun11g02829 740 MobiDBLite consensus disorder prediction 1 20 - -
Viun11g02829 740 MobiDBLite consensus disorder prediction 675 691 - -
Viun11g02829 740 MobiDBLite consensus disorder prediction 675 697 - -
Viun11g02829 740 Pfam Origin recognition complex winged helix C-terminal 611 738 IPR040855 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02829 1 672 Core DNA Replication Machinery Family AT5G16690 47.323 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02829 K02605 - gmx:100780646 1229.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02829 11 40398913 40408303 Viun11g02829 11 40398913 40408303 ECH