Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02822 ATGATTCAGAAAGCTGATATGAGACTCGAATCAGGGACTTGTAATGTTTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCGAGCTCTCATGGGGTCAAAGGTCAAAGAATTCTCTGATGAAAACTCTCGCTTAGGGGAGGGTAATCAGTATTGTGAGGCTGATGGGTCTTCTCCTGGGAGCAGAGCTTGCGAAAGATTGAAGCATGCTAGCGATGACACCAATTACAAGCCTAGTATTTCTTCAACTCATGATTCTCGGTCTGAAAATGCTGAGAATGGACAAGCCTTATCTGAGAAGTATCAGGATTCCAAGTGTTTAGAAAGTCTTGACGATATCACTTCTTGTATCAGTAGGACCAGTAATGCTAATTTAGGGAGTGGTAGGCAACAAAAAAATACAGACAGAGTAAATGTATCCTGTAGTTCGACTTTAGTTAGTCACTTAGAGGCAGAAGGATCTGGACACGGGCCATCTGTTGACATGTCTGGTTTGTTAGAAGGCTGTATGGAAAATGTAGATTCATCATTTACCAAAGAGAGAGTACCTATTATTGCTGCTGATGCAAAACCTGTGGCAGATAAGGAAAACCTAAATAATAGTACAGCCAAAGTTTCAGTGGAAATATGTCCGAAGTCAGAAGCAGATATGGGAAATAATGTTGACGTTGCTAAAGATGAAGATCGTAAATATTCAGCGCATGATGGACTGCATGAGAAGGTCGATGAGCTGATTAAATCATCTAGCAGGTCTGAACCTCAATCAGAAGATGAGGGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAAGATCTACTTGCCATATGTAGTAGGTGTAGTGATGGTGCAGAGCACACCTACTGCATGCGGGAAATGCTTGTCAAGCTCCCGGAAGGTGATTGGTTGTGTGAAGAATGCAAGTGTGCAGAGGAGACGACAAATCAAAGGCTGGTTATTGAAGAAAAAAATCTTCATAAAGTTATTTCAGCTTCACAAATTTCTGGAAAAAGACCTTCTCAAAGCATGGAAATAGCTTCAGCAGCAAAAAGGCAAGCTCTTGAATCGAGCACAGGATCACCGAAGGCATCAAGCCCAAAGAGAATAGTCTCACTCTCACGAGAATCATCTCTCAAAAGCATGGATAAAGGAAAGATGAAGTCTGGGCAACAGATCCCCATGCGTAGCCACCTTGGTGGCGACAATGTAGACCTTGCACGGTCCCTTTCGACTGGCCCTCGGAGTCAAAATCCAAGGAGTACATTGTTGAAGTCCAATTCATTCAACAACTTCAATTCCAAGCCTAGAATCAAACTTGTCGATGAAGTTGTTCCCCAAAAGCAGAAAGGGGGTGTCGAACATATTTCTAAGTATATTGAGACAGTTGCTGGGATGATGAGCAAATCAGTGTCATTCAAATCCTCACACTTGGGGCGTTCAAATACTAATGATTCAAAAGTTAAATCAATTTTTGCTAAACCTGGAATTGTTCAGGATTTGAAACCATCGAGACATACAAAAGAATCGGGTTCACTTGACAAGAAATTTCAACCTAAGATTGATCGACCTGTCATTTATTCAGCTACGGTTAGTTCTGTTGTTTCCACGTCAAAAGGTGATCATAAGCTTGCTCCTCATGGTGAAACTGCTAAACCTTATACAGTTGACAACAATCGAGAGTTTAAGGTCAACCAAGATGGAAAAGTACATTCATTATCGAAGTCTATGAATAATACAGGCAGTAGAAGCCCAGAACCTCAAGTTAGTTCAGATAGAACATCAACCAGTGTTGATGAAACTCAACAGGATAGGATGCCTCGATCACAGGAGACTGTTAATCAGGTTGTCAGAACCAAAGATAGTTCTAGTGATCATGTGAGGTCAGGTGTTACTAATGCTTCAAAGAGTTCATTCTGTCGTAAATGTAAAGATTTTGGCCATGCTACAGAATGTTGCTCGATTAGTGGTACGCTGGAATTTGGTCCCGAAGCATCAGTCATTACTACAAGTAGTTCAAAAAAGGATATGCATAAGGGAAATAGATTGAAAGATGCAATACAGGCAGCTTTGCTTAGAAGGCCTGAAATACACAAGAAGAAAGAAGGTCCTGATGAAACTAACGAGTTTCCTACATCAAGCATTGGTTTCAAACGTGAAGTCAATTCTGAGAACCAAGTGTTGGTTTCCAACACAATGAAGAATAGTATATCTGCTGAAGAAACCAATGTGAAGCAGGAAATTCTTGAGAGTTCTTCATTTGAAACCTCTAAAGGTCCATCTGCTAATGATCCGAAGCAACTTAAATTTTGCCAAACTGATCTCTGCTCTCAGCTGAGAAAGTCAGAATTTGCTGGTCTCACTTCTGGAAAGCCTGTAGTGAGAGACTTGCCAAATAATGGAATGGCGATTTCAAGTGTTCTTTCGAAGATGTCAGTCATTCCGGAATATGAGTACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCGGACTTGTATGCTGGAATTCAGGCACATTTATCCGCATGTGCTTCTCCCAAAGTTATTGAGACAGTAAAGAATTTTTTACCTGAAGTTTCCCTAAATGAAGTTTCTCGATTGAGCATATGGCCTGCACAATTTCATCAAAGTGGTGCTAAGGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACATTGAAAGTTACGAGAGACACTACAAGGGTCTATTGGATCACATGGTTAGAAATGATTTGGCACTTAGGGGGATGTTTGATGGTGTTGAACTTCTCATATTTGCATCCAATCAGCTTCCGGAAGATTCACAACGTTGGAATATGTTATTTTTTCTATGGGGTATATTTAGAGGGAGGAGGATCAGTCATTCAGATTCCACAAAAAGTGCATGTATTCCCAGTTTGAATGTGATGCCAAATGAGAAGGATTTTCCATCTGCCATTATGACTTTGTCTGAAACTTGGTGTTCACCAAGACGCATAGATGAAGAATCCATTGATCAAGGTCACAATATGCCATGTAAGAATTTTGATAGTAAGGGAACTGTGTTTGGCCAGACACATTTGGAATTGCAAGTAAAGTTAGAGAGACAAGATTCTAGAGTCAACACCAAATCTACATCTGGGACTCAGATCACCCGTACGCAATTGTGTCAAGAAATGAATTCCACTGGTTCGTCCCTGGGAGATAGCGAACCAGAGCATAAACGGTACATACAGTCTAAACCTCCTGAAGCAATGGGAACTAGTGTAAGTAGAAGGATTGTGGACACAAAAACTAATCCTGATATTTCTGGTAAGCAAGAGACCTCTTTGTCTTCGGAGATCCCTTCTGTCGTTTGCCAAATAGATACTGCAAGTAATATCATTAAGGATAAACTTTTAGAGTATGATGAGAATCAGCAAAGGCCTAAAAGGAAACAGTTGGGGAATGATCTCAATATTAACGAGGAGGCACCGGGAGAGCTTGATTTGGAAGAGGTCAACTTTCAGGTACCTACTGATAAAAAAATTAAGAATATAGATCTTTCAGATACAGTTCTGGATGCTTCTACAATTAGTTGTCGGAAACGTCCTTTGAATGAGGTAAATGGCAAATTGGAAGACAGAGAAAGTAGCAAGAAGCTGCAAACAAGTTTGGGTGGAGCTTTTGGATGTAACGATTCTGCTGGAGCCAGGGTCTCTTTTAATGGTAGTTTCCCATCACTAGTGAACAATCTTGGTTCCTGTTCTTCGGCTTGCGATGAGAAAATCATCCACGAGGACCTAGGAACGATGGAGAGAACCTTTTTTCCAGTGGACACTCGTAATAAACATAACTCGGGGATGGTTGTGAACAGAGATTCACTGAATGGGCCTCGTGAGTACGTGGACCAATTTGAAGTTGGGATTCCAAATTTGGAGCTTGCTTTGGGGGGTGAAACGAAACCGTCACACAAGGGTATGATGCCTTTCTTTGTTGGTGCAGTTGACAAGAAAATCAACCCAGAAAAGACTCCTGATATCGATATCGAGCGAGACGATGAGAACGTTGCTGCATCTCTTTCCTTGTCACTATCCTTTCCATCTTCAAGCAAAGAACACATGAAACCAGTTAGAAGAGATGAGACTTTGCCCGATGCGAAATCTCCGTTTCTTCTTTTTGGGAGATTCACGGACAAATAA 4203 0.4114 MIQKADMRLESGTCNVCSAPCSSCMHLNRALMGSKVKEFSDENSRLGEGNQYCEADGSSPGSRACERLKHASDDTNYKPSISSTHDSRSENAENGQALSEKYQDSKCLESLDDITSCISRTSNANLGSGRQQKNTDRVNVSCSSTLVSHLEAEGSGHGPSVDMSGLLEGCMENVDSSFTKERVPIIAADAKPVADKENLNNSTAKVSVEICPKSEADMGNNVDVAKDEDRKYSAHDGLHEKVDELIKSSSRSEPQSEDEGDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLVKLPEGDWLCEECKCAEETTNQRLVIEEKNLHKVISASQISGKRPSQSMEIASAAKRQALESSTGSPKASSPKRIVSLSRESSLKSMDKGKMKSGQQIPMRSHLGGDNVDLARSLSTGPRSQNPRSTLLKSNSFNNFNSKPRIKLVDEVVPQKQKGGVEHISKYIETVAGMMSKSVSFKSSHLGRSNTNDSKVKSIFAKPGIVQDLKPSRHTKESGSLDKKFQPKIDRPVIYSATVSSVVSTSKGDHKLAPHGETAKPYTVDNNREFKVNQDGKVHSLSKSMNNTGSRSPEPQVSSDRTSTSVDETQQDRMPRSQETVNQVVRTKDSSSDHVRSGVTNASKSSFCRKCKDFGHATECCSISGTLEFGPEASVITTSSSKKDMHKGNRLKDAIQAALLRRPEIHKKKEGPDETNEFPTSSIGFKREVNSENQVLVSNTMKNSISAEETNVKQEILESSSFETSKGPSANDPKQLKFCQTDLCSQLRKSEFAGLTSGKPVVRDLPNNGMAISSVLSKMSVIPEYEYIWQGVFEVHRNGKPPDLYAGIQAHLSACASPKVIETVKNFLPEVSLNEVSRLSIWPAQFHQSGAKEDNIALYFFAKDIESYERHYKGLLDHMVRNDLALRGMFDGVELLIFASNQLPEDSQRWNMLFFLWGIFRGRRISHSDSTKSACIPSLNVMPNEKDFPSAIMTLSETWCSPRRIDEESIDQGHNMPCKNFDSKGTVFGQTHLELQVKLERQDSRVNTKSTSGTQITRTQLCQEMNSTGSSLGDSEPEHKRYIQSKPPEAMGTSVSRRIVDTKTNPDISGKQETSLSSEIPSVVCQIDTASNIIKDKLLEYDENQQRPKRKQLGNDLNINEEAPGELDLEEVNFQVPTDKKIKNIDLSDTVLDASTISCRKRPLNEVNGKLEDRESSKKLQTSLGGAFGCNDSAGARVSFNGSFPSLVNNLGSCSSACDEKIIHEDLGTMERTFFPVDTRNKHNSGMVVNRDSLNGPREYVDQFEVGIPNLELALGGETKPSHKGMMPFFVGAVDKKINPEKTPDIDIERDDENVAASLSLSLSFPSSSKEHMKPVRRDETLPDAKSPFLLFGRFTDK 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02822 1400 MobiDBLite consensus disorder prediction 75 100 - -
Viun11g02822 1400 MobiDBLite consensus disorder prediction 1147 1166 - -
Viun11g02822 1400 PANTHER - 270 1028 - -
Viun11g02822 1400 MobiDBLite consensus disorder prediction 343 388 - -
Viun11g02822 1400 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 198 332 IPR013083 -
Viun11g02822 1400 MobiDBLite consensus disorder prediction 546 569 - -
Viun11g02822 1400 SMART PHD_3 272 319 IPR001965 -
Viun11g02822 1400 MobiDBLite consensus disorder prediction 343 439 - -
Viun11g02822 1400 MobiDBLite consensus disorder prediction 419 439 - -
Viun11g02822 1400 MobiDBLite consensus disorder prediction 582 641 - -
Viun11g02822 1400 MobiDBLite consensus disorder prediction 245 265 - -
Viun11g02822 1400 SUPERFAMILY FYVE/PHD zinc finger 260 324 IPR011011 -
Viun11g02822 1400 MobiDBLite consensus disorder prediction 70 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02822 Viun-Chr11 40352243 40361722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02822 166 358 C2H2 Transcription Factor Family AT3G01460 21.762 9.50e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02822 - - vun:114169861 2757.24