Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02821 ATGGAAGAACCAAGAACCGCAGTATTGAGTAATCATGATGTTCAAGAGGATATGGTATCCCTCAAATGTGGAAACAAATTGGACAAACATTCTATGATTCAGAAAGCTGATATGAGACTCGAATCAGGGACTTGTAATGTTTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCGAGCTCTCATGGGGTCAAAGGTCAAAGAATTCTCTGATGAAAACTCTCGCTTAGGGGAGGGTAATCAGTATTGTGAGGCTGATGGGTCTTCTCCTGGGAGCAGAGCTTGCGAAAGATTGAAGCATGCTAGCGATGACACCAATTACAAGCCTAGTATTTCTTCAACTCATGATTCTCGGTCTGAAAATGCTGAGAATGGACAAGCCTTATCTGAGAAGTATCAGGATTCCAAGTGTTTAGAAAGTCTTGACGATATCACTTCTTGTATCAGTAGGACCAGTAATGCTAATTTAGGGAGTGGTAGGCAACAAAAAAATACAGACAGAGTAAATGTATCCTGTAGTTCGACTTTAGTTAGTCACTTAGAGGCAGAAGGATCTGGACACGGGCCATCTGTTGACATGTCTGGTTTGTTAGAAGGCTGTATGGAAAATGTAGATTCATCATTTACCAAAGAGAGAGTACCTATTATTGCTGCTGATGCAAAACCTGTGGCAGATAAGGAAAACCTAAATAATAGTACAGCCAAAGTTTCAGTGGAAATATGTCCGAAGTCAGAAGCAGATATGGGAAATAATGTTGACGTTGCTAAAGATGAAGATCGTAAATATTCAGCGCATGATGGACTGCATGAGAAGGTCGATGAGCTGATTAAATCATCTAGCAGGTCTGAACCTCAATCAGAAGATGAGGGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAAGATCTACTTGCCATATGTAGTAGGTGTAGTGATGGTGCAGAGCACACCTACTGCATGCGGGAAATGCTTGTCAAGCTCCCGGAAGGTGATTGGTTGTGTGAAGAATGCAAGTGTGCAGAGGAGACGACAAATCAAAGGCTGGTTATTTCAGCTTCACAAATTTCTGGAAAAAGACCTTCTCAAAGCATGGAAATAGCTTCAGCAGCAAAAAGGCAAGCTCTTGAATCGAGCACAGGATCACCGAAGGCATCAAGCCCAAAGAGAATAGTCTCACTCTCACGAGAATCATCTCTCAAAAGCATGGATAAAGGAAAGATGAAGTCTGGGCAACAGATCCCCATGCGTAGCCACCTTGGTGGCGACAATGTAGACCTTGCACGGTCCCTTTCGACTGGCCCTCGGAGTCAAAATCCAAGGAGTACATTGTTGAAGTCCAATTCATTCAACAACTTCAATTCCAAGCCTAGAATCAAACTTGTCGATGAAGTTGTTCCCCAAAAGCAGAAAGGGGGTGTCGAACATATTTCTAAGTATATTGAGACAGTTGCTGGGATGATGAGCAAATCAGTGTCATTCAAATCCTCACACTTGGGGCGTTCAAATACTAATGATTCAAAAGTTAAATCAATTTTTGCTAAACCTGGAATTGTTCAGGATTTGAAACCATCGAGACATACAAAAGAATCGGGTTCACTTGACAAGAAATTTCAACCTAAGATTGATCGACCTGTCATTTATTCAGCTACGGTTAGTTCTGTTGTTTCCACGTCAAAAGGTGATCATAAGCTTGCTCCTCATGGTGAAACTGCTAAACCTTATACAGTTGACAACAATCGAGAGTTTAAGGTCAACCAAGATGGAAAAGTACATTCATTATCGAAGTCTATGAATAATACAGGCAGTAGAAGCCCAGAACCTCAAGTTAGTTCAGATAGAACATCAACCAGTGTTGATGAAACTCAACAGGATAGGATGCCTCGATCACAGGAGACTGTTAATCAGGTTGTCAGAACCAAAGATAGTTCTAGTGATCATGTGAGGTCAGGTGTTACTAATGCTTCAAAGAGTTCATTCTGTCGTAAATGTAAAGATTTTGGCCATGCTACAGAATGTTGCTCGATTAGTGGTACGCTGGAATTTGGTCCCGAAGCATCAGTCATTACTACAAGTAGTTCAAAAAAGGATATGCATAAGGGAAATAGATTGAAAGATGCAATACAGGCAGCTTTGCTTAGAAGGCCTGAAATACACAAGAAGAAAGAAGGTCCTGATGAAACTAACGAGTTTCCTACATCAAGCATTGGTTTCAAACGTGAAGTCAATTCTGAGAACCAAGTGTTGGTTTCCAACACAATGAAGAATAGTATATCTGCTGAAGAAACCAATGTGAAGCAGGAAATTCTTGAGAGTTCTTCATTTGAAACCTCTAAAGGTCCATCTGCTAATGATCCGAAGCAACTTAAATTTTGCCAAACTGATCTCTGCTCTCAGCTGAGAAAGTCAGAATTTGCTGGTCTCACTTCTGGAAAGCCTGTAGTGAGAGACTTGCCAAATAATGGAATGGCGATTTCAAGTGTTCTTTCGAAGATGTCAGTCATTCCGGAATATGAGTACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCGGACTTGTATGCTGGAATTCAGGCACATTTATCCGCATGTGCTTCTCCCAAAGTTATTGAGACAGTAAAGAATTTTTTACCTGAAGTTTCCCTAAATGAAGTTTCTCGATTGAGCATATGGCCTGCACAATTTCATCAAAGTGGTGCTAAGGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACATTGAAAGTTACGAGAGACACTACAAGGGTCTATTGGATCACATGGTTAGAAATGATTTGGCACTTAGGGGGATGTTTGATGGTGTTGAACTTCTCATATTTGCATCCAATCAGCTTCCGGAAGATTCACAACGTTGGAATATGTTATTTTTTCTATGGGGTATATTTAGAGGGAGGAGGATCAGTCATTCAGATTCCACAAAAAGTGCATGTATTCCCAGTTTGAATGTGATGCCAAATGAGAAGGATTTTCCATCTGCCATTATGACTTTGTCTGAAACTTGGTGTTCACCAAGACGCATAGATGAAGAATCCATTGATCAAGGTCACAATATGCCATGTAAGAATTTTGATAGTAAGGGAACTGTGTTTGGCCAGACACATTTGGAATTGCAAGTAAAGTTAGAGAGACAAGATTCTAGAGTCAACACCAAATCTACATCTGGGACTCAGATCACCCGTACGCAATTGTGTCAAGAAATGAATTCCACTGGTTCGTCCCTGGGAGATAGCGAACCAGAGCATAAACGGTACATACAGTCTAAACCTCCTGAAGCAATGGGAACTAGTGTAAGTAGAAGGATTGTGGACACAAAAACTAATCCTGATATTTCTGGTAAGCAAGAGACCTCTTTGTCTTCGGAGATCCCTTCTGTCGTTTGCCAAATAGATACTGCAAGTAATATCATTAAGGATAAACTTTTAGAGTATGATGAGAATCAGCAAAGGCCTAAAAGGAAACAGTTGGGGAATGATCTCAATATTAACGAGGAGGCACCGGGAGAGCTTGATTTGGAAGAGGTCAACTTTCAGGTACCTACTGATAAAAAAATTAAGAATATAGATCTTTCAGATACAGTTCTGGATGCTTCTACAATTAGTTGTCGGAAACGTCCTTTGAATGAGGTAAATGGCAAATTGGAAGACAGAGAAAGTAGCAAGAAGCTGCAAACAAGTTTGGGTGGAGCTTTTGGATGTAACGATTCTGCTGGAGCCAGGGTCTCTTTTAATGGTAGTTTCCCATCACTAGTGAACAATCTTGGTTCCTGTTCTTCGGCTTGCGATGAGAAAATCATCCACGAGGACCTAGGAACGATGGAGAGAACCTTTTTTCCAGTGGACACTCGTAATAAACATAACTCGGGGATGGTTGTGAACAGAGATTCACTGAATGGGCCTCGTGAGTACGTGGACCAATTTGAAGTTGGGATTCCAAATTTGGAGCTTGCTTTGGGGGGTGAAACGAAACCGTCACACAAGGGTATGATGCCTTTCTTTGTTGGTGCAGTTGACAAGAAAATCAACCCAGAAAAGACTCCTGATATCGATATCGAGCGAGACGATGAGAACGTTGCTGCATCTCTTTCCTTGTCACTATCCTTTCCATCTTCAAGCAAAGAACACATGAAACCAGTTAGAAGAGATGAGACTTTGCCCGATGCGAAATCTCCGTTTCTTCTTTTTGGGAGATTCACGGACAAATAA 4269 0.412 MEEPRTAVLSNHDVQEDMVSLKCGNKLDKHSMIQKADMRLESGTCNVCSAPCSSCMHLNRALMGSKVKEFSDENSRLGEGNQYCEADGSSPGSRACERLKHASDDTNYKPSISSTHDSRSENAENGQALSEKYQDSKCLESLDDITSCISRTSNANLGSGRQQKNTDRVNVSCSSTLVSHLEAEGSGHGPSVDMSGLLEGCMENVDSSFTKERVPIIAADAKPVADKENLNNSTAKVSVEICPKSEADMGNNVDVAKDEDRKYSAHDGLHEKVDELIKSSSRSEPQSEDEGDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLVKLPEGDWLCEECKCAEETTNQRLVISASQISGKRPSQSMEIASAAKRQALESSTGSPKASSPKRIVSLSRESSLKSMDKGKMKSGQQIPMRSHLGGDNVDLARSLSTGPRSQNPRSTLLKSNSFNNFNSKPRIKLVDEVVPQKQKGGVEHISKYIETVAGMMSKSVSFKSSHLGRSNTNDSKVKSIFAKPGIVQDLKPSRHTKESGSLDKKFQPKIDRPVIYSATVSSVVSTSKGDHKLAPHGETAKPYTVDNNREFKVNQDGKVHSLSKSMNNTGSRSPEPQVSSDRTSTSVDETQQDRMPRSQETVNQVVRTKDSSSDHVRSGVTNASKSSFCRKCKDFGHATECCSISGTLEFGPEASVITTSSSKKDMHKGNRLKDAIQAALLRRPEIHKKKEGPDETNEFPTSSIGFKREVNSENQVLVSNTMKNSISAEETNVKQEILESSSFETSKGPSANDPKQLKFCQTDLCSQLRKSEFAGLTSGKPVVRDLPNNGMAISSVLSKMSVIPEYEYIWQGVFEVHRNGKPPDLYAGIQAHLSACASPKVIETVKNFLPEVSLNEVSRLSIWPAQFHQSGAKEDNIALYFFAKDIESYERHYKGLLDHMVRNDLALRGMFDGVELLIFASNQLPEDSQRWNMLFFLWGIFRGRRISHSDSTKSACIPSLNVMPNEKDFPSAIMTLSETWCSPRRIDEESIDQGHNMPCKNFDSKGTVFGQTHLELQVKLERQDSRVNTKSTSGTQITRTQLCQEMNSTGSSLGDSEPEHKRYIQSKPPEAMGTSVSRRIVDTKTNPDISGKQETSLSSEIPSVVCQIDTASNIIKDKLLEYDENQQRPKRKQLGNDLNINEEAPGELDLEEVNFQVPTDKKIKNIDLSDTVLDASTISCRKRPLNEVNGKLEDRESSKKLQTSLGGAFGCNDSAGARVSFNGSFPSLVNNLGSCSSACDEKIIHEDLGTMERTFFPVDTRNKHNSGMVVNRDSLNGPREYVDQFEVGIPNLELALGGETKPSHKGMMPFFVGAVDKKINPEKTPDIDIERDDENVAASLSLSLSFPSSSKEHMKPVRRDETLPDAKSPFLLFGRFTDK 1422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02821 1422 SMART PHD_3 303 350 IPR001965 -
Viun11g02821 1422 MobiDBLite consensus disorder prediction 276 296 - -
Viun11g02821 1422 MobiDBLite consensus disorder prediction 441 461 - -
Viun11g02821 1422 MobiDBLite consensus disorder prediction 604 663 - -
Viun11g02821 1422 SUPERFAMILY FYVE/PHD zinc finger 291 355 IPR011011 -
Viun11g02821 1422 MobiDBLite consensus disorder prediction 366 410 - -
Viun11g02821 1422 MobiDBLite consensus disorder prediction 1169 1188 - -
Viun11g02821 1422 MobiDBLite consensus disorder prediction 101 131 - -
Viun11g02821 1422 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 230 362 IPR013083 -
Viun11g02821 1422 MobiDBLite consensus disorder prediction 106 131 - -
Viun11g02821 1422 PANTHER - 301 1050 - -
Viun11g02821 1422 MobiDBLite consensus disorder prediction 568 591 - -
Viun11g02821 1422 MobiDBLite consensus disorder prediction 366 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02821 Viun-Chr11 40352243 40361722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02821 197 360 C2H2 Transcription Factor Family AT3G01460 21.951 2.80e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02821 - - vun:114169861 2794.61