Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02820 ATGGAAGAACCAAGAACCGCAGTATTGAGTAATCATGATGTTCAAGAGGATATGGTATCCCTCAAATGTGGAAACAAATTGGACAAACATTCTATGATTCAGAAAGCTGATATGAGACTCGAATCAGGGACTTGTAATGTTTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCGAGCTCTCATGGGGTCAAAGGTCAAAGAATTCTCTGATGAAAACTCTCGCTTAGGGGAGGGTAATCAGTATTGTGAGGCTGATGGGTCTTCTCCTGGGAGCAGAGCTTGCGAAAGATTGAAGCATGCTAGCGATGACACCAATTACAAGCCTAGTATTTCTTCAACTCATGATTCTCGGTCTGAAAATGCTGAGAATGGACAAGCCTTATCTGAGAAGTATCAGGATTCCAAGTGTTTAGAAAGTCTTGACGATATCACTTCTTGTATCAGTAGGACCAGTAATGCTAATTTAGGGAGTGGTAGGCAACAAAAAAATACAGACAGAGTAAATGTATCCTGTAGTTCGACTTTAGTTAGTCACTTAGAGGCAGAAGGATCTGGACACGGGCCATCTGTTGACATGTCTGGTTTGTTAGAAGGCTGTATGGAAAATGTAGATTCATCATTTACCAAAGAGAGAGTACCTATTATTGCTGCTGATGCAAAACCTGTGGCAGATAAGGAAAACCTAAATAATAGTACAGCCAAAGTTTCAGTGGAAATATGTCCGAAGTCAGAAGCAGATATGGGAAATAATGTTGACGTTGCTAAAGATGAAGATCGTAAATATTCAGCGCATGATGGACTGCATGAGAAGGTCGATGAGCTGATTAAATCATCTAGCAGGTCTGAACCTCAATCAGAAGATGAGGGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAAGATCTACTTGCCATATGTAGTAGGTGTAGTGATGGTGCAGAGCACACCTACTGCATGCGGGAAATGCTTGTCAAGCTCCCGGAAGGTGATTGGTTGTGTGAAGAATGCAAGTGTGCAGAGGAGACGACAAATCAAAGGCTGGTTATTGAAGAAAAAAATCTTCATAAAGTTATTTCAGCTTCACAAATTTCTGGAAAAAGACCTTCTCAAAGCATGGAAATAGCTTCAGCAGCAAAAAGGCAAGCTCTTGAATCGAGCACAGGATCACCGAAGGCATCAAGCCCAAAGAGAATAGTCTCACTCTCACGAGAATCATCTCTCAAAAGCATGGATAAAGGAAAGATGAAGTCTGGGCAACAGATCCCCATGCGTAGCCACCTTGGTGGCGACAATGTAGACCTTGCACGGTCCCTTTCGACTGGCCCTCGGAGTCAAAATCCAAGGAGTACATTGTTGAAGTCCAATTCATTCAACAACTTCAATTCCAAGCCTAGAATCAAACTTGTCGATGAAGTTGTTCCCCAAAAGCAGAAAGGGGGTGTCGAACATATTTCTAAGTATATTGAGACAGTTGCTGGGATGATGAGCAAATCAGTGTCATTCAAATCCTCACACTTGGGGCGTTCAAATACTAATGATTCAAAAGTTAAATCAATTTTTGCTAAACCTGGAATTGTTCAGGATTTGAAACCATCGAGACATACAAAAGAATCGGGTTCACTTGACAAGAAATTTCAACCTAAGATTGATCGACCTGTCATTTATTCAGCTACGGTTAGTTCTGTTGTTTCCACGTCAAAAGGTGATCATAAGCTTGCTCCTCATGGTGAAACTGCTAAACCTTATACAGTTGACAACAATCGAGAGTTTAAGGTCAACCAAGATGGAAAAGTACATTCATTATCGAAGTCTATGAATAATACAGGCAGTAGAAGCCCAGAACCTCAAGTTAGTTCAGATAGAACATCAACCAGTGTTGATGAAACTCAACAGGATAGGATGCCTCGATCACAGGAGACTGTTAATCAGGTTGTCAGAACCAAAGATAGTTCTAGTGATCATGTGAGGTCAGGTGTTACTAATGCTTCAAAGAGTTCATTCTGTCGTAAATGTAAAGATTTTGGCCATGCTACAGAATGTTGCTCGATTAGTGGTACGCTGGAATTTGGTCCCGAAGCATCAGTCATTACTACAAGTAGTTCAAAAAAGGATATGCATAAGGGAAATAGATTGAAAGATGCAATACAGGCAGCTTTGCTTAGAAGGCCTGAAATACACAAGAAGAAAGAAGGTCCTGATGAAACTAACGAGTTTCCTACATCAAGCATTGGTTTCAAACGTGAAGTCAATTCTGAGAACCAAGTGTTGGTTTCCAACACAATGAAGAATAGTATATCTGCTGAAGAAACCAATGTGAAGCAGGAAATTCTTGAGAGTTCTTCATTTGAAACCTCTAAAGGTCCATCTGCTAATGATCCGAAGCAACTTAAATTTTGCCAAACTGATCTCTGCTCTCAGCTGAGAAAGTCAGAATTTGCTGGTCTCACTTCTGGAAAGCCTGTAGTGAGAGACTTGCCAAATAATGGAATGGCGATTTCAAGTGTTCTTTCGAAGATGTCAGTCATTCCGGAATATGAGTACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCGGACTTGTATGCTGGAATTCAGGCACATTTATCCGCATGTGCTTCTCCCAAAGTTATTGAGACAGTAAAGAATTTTTTACCTGAAGTTTCCCTAAATGAAGTTTCTCGATTGAGCATATGGCCTGCACAATTTCATCAAAGTGGTGCTAAGGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACATTGAAAGTTACGAGAGACACTACAAGGGTCTATTGGATCACATGGTTAGAAATGATTTGGCACTTAGGGGGATGTTTGATGGTGTTGAACTTCTCATATTTGCATCCAATCAGCTTCCGGAAGATTCACAACGTTGGAATATGTTATTTTTTCTATGGGGTATATTTAGAGGGAGGAGGATCAGTCATTCAGATTCCACAAAAAGTGCATGTATTCCCAGTTTGAATGTGATGCCAAATGAGAAGGATTTTCCATCTGCCATTATGACTTTGTCTGAAACTTGGTGTTCACCAAGACGCATAGATGAAGAATCCATTGATCAAGGTCACAATATGCCATGTAAGAATTTTGATAGTAAGGGAACTGTGTTTGGCCAGACACATTTGGAATTGCAAGTAAAGTTAGAGAGACAAGATTCTAGAGTCAACACCAAATCTACATCTGGGACTCAGATCACCCGTACGCAATTGTGTCAAGAAATGAATTCCACTGGTTCGTCCCTGGGAGATAGCGAACCAGAGCATAAACGGTACATACAGTCTAAACCTCCTGAAGCAATGGGAACTAGTGTAAGTAGAAGGATTGTGGACACAAAAACTAATCCTGATATTTCTGGTAAGCAAGAGACCTCTTTGTCTTCGGAGATCCCTTCTGTCGTTTGCCAAATAGATACTGCAAGTAATATCATTAAGGATAAACTTTTAGAGTATGATGAGAATCAGCAAAGGCCTAAAAGGAAACAGTTGGGGAATGATCTCAATATTAACGAGGAGGCACCGGGAGAGCTTGATTTGGAAGAGGTCAACTTTCAGGTACCTACTGATAAAAAAATTAAGAATATAGATCTTTCAGATACAGTTCTGGATGCTTCTACAATTAGTTGTCGGAAACGTCCTTTGAATGAGGTAAATGGCAAATTGGAAGACAGAGAAAGTAGCAAGAAGCTGCAAACAAGTTTGGGTGGAGCTTTTGGATGTAACGATTCTGCTGGAGCCAGGGTCTCTTTTAATGGTAGTTTCCCATCACTAGTGAACAATCTTGGTTCCTGTTCTTCGGCTTGCGATGAGAAAATCATCCACGAGGACCTAGGAACGATGGAGAGAACCTTTTTTCCAGTGGACACTCGTAATAAACATAACTCGGGGATGGTTGTGAACAGAGATTCACTGAATGGGCCTCGTGAGTACGTGGACCAATTTGAAGTTGGGATTCCAAATTTGGAGCTTGCTTTGGGGGGTGAAACGAAACCGTCACACAAGGGTATGATGCCTTTCTTTGTTGGTGCAGTTGACAAGAAAATCAACCCAGAAAAGACTCCTGATATCGATATCGAGCGAGACGATGAGAACGTTGCTGCATCTCTTTCCTTGTCACTATCCTTTCCATCTTCAAGCAAAGAACACATGAAACCAGTTAGAAGAGATGAGACTTTGCCCGATGCGAAATCTCCGTTTCTTCTTTTTGGGAGATTCACGGACAAATAA 4296 0.4106 MEEPRTAVLSNHDVQEDMVSLKCGNKLDKHSMIQKADMRLESGTCNVCSAPCSSCMHLNRALMGSKVKEFSDENSRLGEGNQYCEADGSSPGSRACERLKHASDDTNYKPSISSTHDSRSENAENGQALSEKYQDSKCLESLDDITSCISRTSNANLGSGRQQKNTDRVNVSCSSTLVSHLEAEGSGHGPSVDMSGLLEGCMENVDSSFTKERVPIIAADAKPVADKENLNNSTAKVSVEICPKSEADMGNNVDVAKDEDRKYSAHDGLHEKVDELIKSSSRSEPQSEDEGDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLVKLPEGDWLCEECKCAEETTNQRLVIEEKNLHKVISASQISGKRPSQSMEIASAAKRQALESSTGSPKASSPKRIVSLSRESSLKSMDKGKMKSGQQIPMRSHLGGDNVDLARSLSTGPRSQNPRSTLLKSNSFNNFNSKPRIKLVDEVVPQKQKGGVEHISKYIETVAGMMSKSVSFKSSHLGRSNTNDSKVKSIFAKPGIVQDLKPSRHTKESGSLDKKFQPKIDRPVIYSATVSSVVSTSKGDHKLAPHGETAKPYTVDNNREFKVNQDGKVHSLSKSMNNTGSRSPEPQVSSDRTSTSVDETQQDRMPRSQETVNQVVRTKDSSSDHVRSGVTNASKSSFCRKCKDFGHATECCSISGTLEFGPEASVITTSSSKKDMHKGNRLKDAIQAALLRRPEIHKKKEGPDETNEFPTSSIGFKREVNSENQVLVSNTMKNSISAEETNVKQEILESSSFETSKGPSANDPKQLKFCQTDLCSQLRKSEFAGLTSGKPVVRDLPNNGMAISSVLSKMSVIPEYEYIWQGVFEVHRNGKPPDLYAGIQAHLSACASPKVIETVKNFLPEVSLNEVSRLSIWPAQFHQSGAKEDNIALYFFAKDIESYERHYKGLLDHMVRNDLALRGMFDGVELLIFASNQLPEDSQRWNMLFFLWGIFRGRRISHSDSTKSACIPSLNVMPNEKDFPSAIMTLSETWCSPRRIDEESIDQGHNMPCKNFDSKGTVFGQTHLELQVKLERQDSRVNTKSTSGTQITRTQLCQEMNSTGSSLGDSEPEHKRYIQSKPPEAMGTSVSRRIVDTKTNPDISGKQETSLSSEIPSVVCQIDTASNIIKDKLLEYDENQQRPKRKQLGNDLNINEEAPGELDLEEVNFQVPTDKKIKNIDLSDTVLDASTISCRKRPLNEVNGKLEDRESSKKLQTSLGGAFGCNDSAGARVSFNGSFPSLVNNLGSCSSACDEKIIHEDLGTMERTFFPVDTRNKHNSGMVVNRDSLNGPREYVDQFEVGIPNLELALGGETKPSHKGMMPFFVGAVDKKINPEKTPDIDIERDDENVAASLSLSLSFPSSSKEHMKPVRRDETLPDAKSPFLLFGRFTDK 1431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02820 1431 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 230 363 IPR013083 -
Viun11g02820 1431 SMART PHD_3 303 350 IPR001965 -
Viun11g02820 1431 MobiDBLite consensus disorder prediction 276 296 - -
Viun11g02820 1431 MobiDBLite consensus disorder prediction 613 672 - -
Viun11g02820 1431 MobiDBLite consensus disorder prediction 374 419 - -
Viun11g02820 1431 MobiDBLite consensus disorder prediction 374 470 - -
Viun11g02820 1431 PANTHER - 301 1059 - -
Viun11g02820 1431 MobiDBLite consensus disorder prediction 450 470 - -
Viun11g02820 1431 MobiDBLite consensus disorder prediction 577 600 - -
Viun11g02820 1431 SUPERFAMILY FYVE/PHD zinc finger 291 355 IPR011011 -
Viun11g02820 1431 MobiDBLite consensus disorder prediction 101 131 - -
Viun11g02820 1431 MobiDBLite consensus disorder prediction 106 131 - -
Viun11g02820 1431 MobiDBLite consensus disorder prediction 1178 1197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02820 Viun-Chr11 40352243 40361722 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02820 197 389 C2H2 Transcription Factor Family AT3G01460 21.762 1.05e-07 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02820 - - vun:114169861 2820.03