Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun11g02817 | ATGTCAAGAATCCCGCAGGTTGTAACATGCAAAGCTGCAATATGCTGGGGATTAGGTCAACCTGTTACAGTAGAAGAGATACAGGTTGATCCACCAAAAGCAACAGAAGTTCGAGTTAAGATGCTCTGTTCCAGTTTATGCCACACAGACATAACAAGCCTTCAAGGATTCCCACATATGAAATTTCCTCGAGCACTTGGGCACGAAGGAGTTGGTGTTGTGGAGAGTGTTGGTGACCAAGTGACAACCCTTAAAGAGGGCGATGTGGTGATCCCTACATACATAGGCGAGTGTGAAACATGTGAGAATTGTGTTTCCGGAAAAACCAATCTATGTCTGACAAACCCTGTGAGATTAACTGGTTTACTACCAGATGAGACTTCAAGAATGTCCATCAGAGGACAGAGGCTGTACCATGTTCTAAGTTGTGCTACATGGTCAGAATACATGGTTAGTGATGTCAATTACGTTCTCAAAGTTGATCCAACCATTGATCCAACCCATGCCAGTTTCATCTCGTGTGGGTTTTCAACTGGGTATGGAGCTGCTTGGAAAGAAGCCAAGGTTGAAAGTGGGTCCAGTGTAGCTGTTTTGGGTCTTGGTGCTGTTGGTTTAGGGGCTATAAGCGGAGCCAAAGCTATGGGAGCAGCTAAGATAATTGGAATTGACAAAAACGAGAAGAAGAGGGAAAAAGGAGAGGCTTTTGGAATGAACCACTTCATAAATCCAAGTGATTCTGCTAAATCTGTTTCAGAATTGGTAAAGGAAGCAACTGGTGGAATGGGTGTGGATTATTCCTTTGAGTGCACCGGAATTCCTCCTATGCTTACCGAATCATTGGAAGCCACAAAAATGGGAACGGGTAAAACAGTAGTAGTTGGAATACCAGCAGAACCTACTGTCCCATTGGGTCTCATAGCCATTCTTTTGGGTAGAACTTTGAAAGGTTCAGTTTTTGGGGGCTTAAAAGTTAGGTCTGATCTCTCCATAGTAGTTGACAAAAGCCAGAAAAAGGAATTCCCTCTTGAAGAACTATGGAGCCATGAGGTCCCATTAGAAGATATTAAGAATGCATTCGTGATATTGAAGGAGCCCAGTTGTCTGAAAATTGTCATCAAGATGTCACATTTATGA | 1134 | 0.4312 | MSRIPQVVTCKAAICWGLGQPVTVEEIQVDPPKATEVRVKMLCSSLCHTDITSLQGFPHMKFPRALGHEGVGVVESVGDQVTTLKEGDVVIPTYIGECETCENCVSGKTNLCLTNPVRLTGLLPDETSRMSIRGQRLYHVLSCATWSEYMVSDVNYVLKVDPTIDPTHASFISCGFSTGYGAAWKEAKVESGSSVAVLGLGAVGLGAISGAKAMGAAKIIGIDKNEKKREKGEAFGMNHFINPSDSAKSVSELVKEATGGMGVDYSFECTGIPPMLTESLEATKMGTGKTVVVGIPAEPTVPLGLIAILLGRTLKGSVFGGLKVRSDLSIVVDKSQKKEFPLEELWSHEVPLEDIKNAFVILKEPSCLKIVIKMSHL | 377 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun11g02817 | 377 | FunFam | S-(hydroxymethyl)glutathione dehydrogenase | 179 | 317 | - | - | |
Viun11g02817 | 377 | Gene3D | - | 14 | 369 | - | - | |
Viun11g02817 | 377 | CDD | liver_alcohol_DH_like | 8 | 373 | - | - | |
Viun11g02817 | 377 | Pfam | Zinc-binding dehydrogenase | 202 | 324 | IPR013149 | - | |
Viun11g02817 | 377 | PANTHER | ALCOHOL DEHYDROGENASE | 6 | 366 | - | - | |
Viun11g02817 | 377 | FunFam | alcohol dehydrogenase 1-like isoform X1 | 18 | 178 | - | - | |
Viun11g02817 | 377 | Pfam | Alcohol dehydrogenase GroES-like domain | 35 | 159 | IPR013154 | - | |
Viun11g02817 | 377 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 164 | 335 | IPR036291 | - | |
Viun11g02817 | 377 | SMART | PKS_ER_names_mod | 17 | 372 | IPR020843 | GO:0016491 | |
Viun11g02817 | 377 | SUPERFAMILY | GroES-like | 5 | 190 | IPR011032 | - | |
Viun11g02817 | 377 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 67 | 81 | IPR002328 | GO:0008270|GO:0016491 | |
Viun11g02817 | 377 | Gene3D | - | 179 | 317 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun11g02817 | Viun-Chr11 | 40348780 | 40351126 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun11g02817 | 35 | 323 | Monolignol Biosynthesis Gene Families | AT2G21730 | 29.831 | 1.14e-19 | 87.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun11g02817 | K00121 | - | gmx:100798341 | 578.941 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun11g02817 | 11 | 40348780 | 40351126 | Viun11g02817 | 11 | 40348780 | 40351126 | ECH |