Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02816 ATGGCTGCTGCTGCTGACAACACCAACCCTCCAAAGGATTATTACAAATTGCTGGAGGTTGATTATGATGCAACTGATGAAAATATCAAATTAAATTACCGAAGACTCGCATTGAAATGGCATCCTGACAAGCACGGAGGTGACAATGCTGTTACTACAAAATTTCAAGAGATAAATGAAGCTTACAATGTATTAAGTGATCCTGCCAAGCGTTTTGACTATGATTTAACGGGGATATGCGAAATTGAAAAATATAGTTTACAGGAATATCTTGCCAGATTTAAAGGCATGATTCTTACCTGCAATGGACTTGGTATCAACCAAACAGACAGATGGTCACCCCAATTGATTGAAAATTTTGAATCCCTTGATAAATAA 378 0.3704 MAAAADNTNPPKDYYKLLEVDYDATDENIKLNYRRLALKWHPDKHGGDNAVTTKFQEINEAYNVLSDPAKRFDYDLTGICEIEKYSLQEYLARFKGMILTCNGLGINQTDRWSPQLIENFESLDK 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02816 125 SMART dnaj_3 12 70 IPR001623 -
Viun11g02816 125 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 6 109 - -
Viun11g02816 125 Gene3D DnaJ domain 2 91 IPR036869 -
Viun11g02816 125 PRINTS DnaJ domain signature 15 33 IPR001623 -
Viun11g02816 125 PRINTS DnaJ domain signature 50 70 IPR001623 -
Viun11g02816 125 PRINTS DnaJ domain signature 33 48 IPR001623 -
Viun11g02816 125 FunFam Chaperone protein DNAj, putative 5 92 - -
Viun11g02816 125 Pfam DnaJ domain 13 75 IPR001623 -
Viun11g02816 125 CDD DnaJ 13 67 IPR001623 -
Viun11g02816 125 ProSiteProfiles dnaJ domain profile. 13 78 IPR001623 -
Viun11g02816 125 SUPERFAMILY Chaperone J-domain 10 98 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02816 Viun-Chr11 40339789 40343789 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02816 4 75 C2H2 Transcription Factor Family AT1G74250 38.961 1.87e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02816 - - gmx:100305987 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02816 11 40339789 40343789 Viun11g02816 11 40339789 40343789 ECH