Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02809 ATGAGAGGTTTCAATGAAGACCATGGTGTTGTGGGCGGAAAGGAAGAAGAAAACGTGTGGCCCTCGTGGCTACGGCCACTTCTCAAGACGAGTTTTTTCGTTCAATGCAAAGTTCACGCAGATTCCCACAAGAATGAATGCAATATGTATTGCTTGGACTGTGTGAATGGAGCCCTTTGTTCTGCATGTCTTGCTTCCCACAAAGAACACAGAACAATCCAGATAAGGAGATCTTCATACCATGATGTGATAAGGGTGTCTGAGATACAGAAATTTCTGGACATCACAGGCGTTCAAACTTACATTATCAACAGTGCCAAGATTGTGTTCTTGAATGAGAGGCCTCAACCAAGGCCCGGAAAAGGGGTCACCAATACCTGCCAAGTCTGTGATCGCAGCCTCCTTGATTCCTTCAGCTTCTGCTCTCTTGGTTGTAAGATTGTTGGAACCTCCAAAAAGTTCCGGAAGAAGAAAATGTTAGGTGAGACAGAAGGGTCTGATGGTGAAGAATCAGTGAACGGCATAAGCAATGTAAATGGTGGCAGAAGCAAAATCCATAGCTTTACACCTTCAACACCACCACCAACAGTGGCTAATTACAGAACTGCAAAGAGAAGGAAAGGAATTCCACATAGAGCTCCAATGGGTGGAGGACTCATTATAGAATACAACGTTGTATAG 681 0.4435 MRGFNEDHGVVGGKEEENVWPSWLRPLLKTSFFVQCKVHADSHKNECNMYCLDCVNGALCSACLASHKEHRTIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCDRSLLDSFSFCSLGCKIVGTSKKFRKKKMLGETEGSDGEESVNGISNVNGGRSKIHSFTPSTPPPTVANYRTAKRRKGIPHRAPMGGGLIIEYNVV 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02809 226 CDD Bbox2 36 75 - -
Viun11g02809 226 MobiDBLite consensus disorder prediction 160 198 - -
Viun11g02809 226 MobiDBLite consensus disorder prediction 169 198 - -
Viun11g02809 226 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 15 215 - -
Viun11g02809 226 Pfam PLATZ transcription factor 76 147 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02809 Viun-Chr11 40320270 40322496 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Viun11g02809 PLATZ 3.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02809 - - gmx:100810757 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02809 11 40320270 40322496 Viun2g02808 2 32859801 32862117 ECH
Viun11g02809 11 40320270 40322496 Viun11g02809 11 40320270 40322496 ECH