LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun11g02808	ATGAGAGGTTTCAATGAAGACCATGGTGTTGTGGGCGGAAAGGAAGAAGAAAACGTGTGGCCCTCGTGGCTACGGCCACTTCTCAAGACGAGTTTTTTCGTTCAATGCAAAGTTCACGCAGATTCCCACAAGAATGAATGCAATATGTATTGCTTGGACTGTGTGAATGGAGCCCTTTGTTCTGCATGTCTTGCTTCCCACAAAGAACACAGAACAATCCAGATAAGGAGATCTTCATACCATGATGTGATAAGGGTGTCTGAGATACAGAAATTTCTGGACATCACAGGCGTTCAAACTTACATTATCAACAGTGCCAAGATTGTGTTCTTGAATGAGAGGCCTCAACCAAGGCCCGGAAAAGGGGTCACCAATACCTGCCAAGTCTGTGATCGCAGCCTCCTTGATTCCTTCAGCTTCTGCTCTCTTGGTTGTAAGACTTTTAAATTTTCTTCTCAGATTGTTGGAACCTCCAAAAAGTTCCGGAAGAAGAAAATGTTAGGTGAGACAGAAGGGTCTGATGGTGAAGAATCAGTGAACGGCATAAGCAATGTAAATGGTGGCAGAAGCAAAATCCATAGCTTTACACCTTCAACACCACCACCAACAGTGGCTAATTACAGAACTGCAAAGAGAAGGAAAGGAATTCCACATAGAGCTCCAATGGGTGGAGGACTCATTATAGAATACAACGTTGTATAG	702	0.4373	MRGFNEDHGVVGGKEEENVWPSWLRPLLKTSFFVQCKVHADSHKNECNMYCLDCVNGALCSACLASHKEHRTIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCDRSLLDSFSFCSLGCKTFKFSSQIVGTSKKFRKKKMLGETEGSDGEESVNGISNVNGGRSKIHSFTPSTPPPTVANYRTAKRRKGIPHRAPMGGGLIIEYNVV	233

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun11g02808	233	CDD	Bbox2	36	75	-	-
	Viun11g02808	233	PANTHER	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	15	222	-	-
	Viun11g02808	233	Pfam	PLATZ transcription factor	76	146	IPR006734	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun11g02808	Viun-Chr11	40320234	40322500	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	PLATZ	Viun11g02808		PLATZ	9.2e-29	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun11g02808	-		-	gmx:100810757	408.683