Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02779 ATGTCAGAAGGAATTACTTTGGATGAAACTACCCACATTTTCAGATCAAAGTTACCAGACATTCCACTCCCCAACAACCTCCTCCTCCACAAATACTGCTTCCTTAAACTTCCCGAAGTCGCCAACCGCACATGCCTCATCGCCGCCGCCAGAACCTACACCTACGCCGACACTCACCGCGCCTCGCGGAAGGTGGCCGCCGGCATGTCGAAGCTGGGCATCCAGAAGGGCGACACCGTCATGATTCTCCTCCCCAACTCCCCGGAGTTCGTCTTCACCTTCATGGCGGTCTCCATGCTCGGCGCCGTCGCCACCACCGCCAACCCCTCCTACACCGCCGCCGAACTCGCCAAGCAACTGGCCGTCTCCAACGCCAAGCTCGTCGTCACGCTCTCCGCCCACGTCCACAAGCTCAACAACCAGCAAGCGCAGCACCGCTTCTTCAAGGTGGTAACCGTCGACGACCCACCGGAGAATTGCTCGGCTTTCCCGGAGGGCGACGAGAGCGAGGTTCCGGAGGTTGAGATATCAGTGGAGGACGCGGTGGCGCTGCCGTTTTCGTCGGGGACGACGGGGCTGGCGAAGGGGGTGATTCTGACGCACAAGAGTTTGGTAACCAGCGTGGCGCAACTGATAGAGGGAGAGAACCCGCACATGTACCTGAAAGAAGAGGACGTTGTGCTGTGCGTGCTTCCTCTGTTTCACGTGTTCGCCATGCACATCGTGATGATGTGTGGGATGAGAACGGGGAGCGCTATTTTGCTGATCGAGAAGTTTGAGATGAGGACGCTGCTGGAGGCGATTGAGAAACATAGGGTGACGGTGGCGATACTGGTGCCGCCGCTGGTGGTGGCGCTTACGAAGAACACGGCGGTGGAGAAGTACGATTTGAGTTCGATACGGTTGGTTATGTCGGGGGCTGCGCCGCTGGGGCTACAGGCGGAAGAGGCTCTGCGGAAGAGGTTGCCCAACGCCATTCTAGGACAAGGATATGGAATGACAGAGAGTGGACCAGTGTTGACCATGTCTTTGGGTTTTGCAAAGTTTCCATTTCCAACCAAGTGTGGTTCGTGCGGAACTGTGGTGAGAAACGCTGAGATGAAGGTGATTCACCCTCTAACTTCCTTGTCTCTTCCCCGTAACGAGCATGGCGAGATTTGCGTGCGTGGCTCTCAGATCATGAAAGGGTATCTGAATGACGAGAAGGCCACTGCAGAAACCATTGATGCAGATGGTTGGCTTCATACAGGTGACATTGGCTACGTTGATGATGATGATGAGGTTTTCCTCGTTGATAGGGCCAAGGAACTCATCAAATTCAAAGCCTTCCAGGTGCCGCCGGCGGAACTTGAAGACCTCCTCAGGAGCCACCCTTCGATTGCAGATGCAGCTGTTGTTCCGCAAAAAGACGATGCTGCCGGCGAAGTTCCGGTGGCTTTCGTTGTCGGCTTTGATCTTACAGAAGATGCTGTAAAGGATTTTGTAGCTAAACAGAGAATACACAAAGTGTATTTTGTTGATGCAATTCCAAAGTCTCAGACGGGAAAGATATTAAGAAAAGAACTCAGAGCAAAGCTGGCGAAGATTATTGAGAGGAACTAA 1602 0.5412 MSEGITLDETTHIFRSKLPDIPLPNNLLLHKYCFLKLPEVANRTCLIAAARTYTYADTHRASRKVAAGMSKLGIQKGDTVMILLPNSPEFVFTFMAVSMLGAVATTANPSYTAAELAKQLAVSNAKLVVTLSAHVHKLNNQQAQHRFFKVVTVDDPPENCSAFPEGDESEVPEVEISVEDAVALPFSSGTTGLAKGVILTHKSLVTSVAQLIEGENPHMYLKEEDVVLCVLPLFHVFAMHIVMMCGMRTGSAILLIEKFEMRTLLEAIEKHRVTVAILVPPLVVALTKNTAVEKYDLSSIRLVMSGAAPLGLQAEEALRKRLPNAILGQGYGMTESGPVLTMSLGFAKFPFPTKCGSCGTVVRNAEMKVIHPLTSLSLPRNEHGEICVRGSQIMKGYLNDEKATAETIDADGWLHTGDIGYVDDDDEVFLVDRAKELIKFKAFQVPPAELEDLLRSHPSIADAAVVPQKDDAAGEVPVAFVVGFDLTEDAVKDFVAKQRIHKVYFVDAIPKSQTGKILRKELRAKLAKIIERN 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02779 533 Gene3D - 434 530 IPR045851 -
Viun11g02779 533 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 524 - -
Viun11g02779 533 SUPERFAMILY Acetyl-CoA synthetase-like 11 530 - -
Viun11g02779 533 CDD 4CL 23 522 - -
Viun11g02779 533 FunFam Long-chain-fatty-acid--CoA ligase FadD 15 435 - -
Viun11g02779 533 Pfam AMP-binding enzyme 42 440 IPR000873 -
Viun11g02779 533 Gene3D - 5 433 IPR042099 -
Viun11g02779 533 Pfam AMP-binding enzyme C-terminal domain 449 516 IPR025110 -
Viun11g02779 533 ProSitePatterns Putative AMP-binding domain signature. 184 195 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02779 Viun-Chr11 40195035 40197430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02779 13 466 Monolignol Biosynthesis Gene Families AT3G21240 60.087 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02779 K01904 - gmx:100790396 831.247