Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02777 ATGGATGCCCCCAAGGATGATCAAAATGTTGTAACCATAGATGTCCATGCTGCTAAAAATCTGCTAAATTCATCAGATTATCGTTATCTGGATGTGAGGTCAGTTGAGGAATTCAATAAAAGCCATGTTGAGAATGCTTATAATGTCCCCTACATGTTCATCACAGAAGCAGGACGGGTGAAAAATCCAGAATTTGTTGAGCAGGTGGCAGCAATATGCAAGAATGAGGATCATTTAATTGTGGCTTGCAATAGTGGAGGAAGATCACTCCGAGCCAGCGTTGATTTACTTGATTCGGGATTTAAACATGTTGTGAATATGGGAGGAGGCTACTCTGCATGGGTTGATGCTGGATTTGCTGGGGACAAGCCACCAGAAGAGCTCAAAACTAGTTGTAAGATTCGTCGTTAA 411 0.4209 MDAPKDDQNVVTIDVHAAKNLLNSSDYRYLDVRSVEEFNKSHVENAYNVPYMFITEAGRVKNPEFVEQVAAICKNEDHLIVACNSGGRSLRASVDLLDSGFKHVVNMGGGYSAWVDAGFAGDKPPEELKTSCKIRR 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02777 136 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 9 119 IPR036873 -
Viun11g02777 136 SMART rhod_4 13 120 IPR001763 -
Viun11g02777 136 ProSiteProfiles Rhodanese domain profile. 23 123 IPR001763 -
Viun11g02777 136 Gene3D - 2 120 IPR036873 -
Viun11g02777 136 PANTHER THIOSULFATE SULFURTRANSFERASE 18 3 123 IPR044684 GO:0003824
Viun11g02777 136 Pfam Rhodanese-like domain 17 116 IPR001763 -
Viun11g02777 136 CDD RHOD 18 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02777 Viun-Chr11 40189046 40190697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02777 8 127 Sulfurtransferasese or Rhodanese AT5G66170 48.361 3.93e-36 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02777 K22547 - gmx:100794624 250.366