Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02774 ATGGCTTACATGTGTGCAGACAGTGGAAACCTCATGGCCATTGCGCAGCAAGTCATCAAGCAGAAGCAGCAGCAAGAACAGCAGCAACAAAAACAGCACCAGCAGCACCACCACCAACACCATCACCACCACCACCATCATCATCACCAACACCATCTCAACCCTCTCTCCCTACATCCAATTCCATGGAACAACACCCCCACTCTCGGTTACCCTCTCCATCCCACCGACTTCCCCGACCCCTTCCAACCCGATCCACCATTCCATTTCCCGGACACGCAATCCGCACCCGCACCGGCCCCCTTCCGCTTCTCCGATTTCGACTCCGACGACTGGATGGACTCTCTCATCGCCGCCGCCGACACTCCCTCCTGGCACACCAATGCCGATTTCCCCTTCCCCTCCGATCTCAACCGCCTCATCTTCCCCACCTCCGACACTGCCACCGCCACCGCCGCCACCTCGCTCCCGCTCCAGCCAACCCCTCCCCCGCCGCCGCAGGAGCCCCTCGACGCCGGCGTCTCCTCCGAATCCGACTCCGCTCACCCGCTCCTCAAAGCCCTAACAGAGTGCGCCTCGCTCGTGGAGAGCGAACCGGATCAGGCCGCGGAATCGTTGGCCCGGCTGAGAAAATCTGTATCCCAGCACGGAAACCCCACTCAGCGAGTGGGCTTCTACTTCTGCGAAGCCCTCTCCCGTAAAATATGGGCCGAGAAAGAGAAGGGAGAGCCCAAAAGCGCGACCACAACCACCTCAGAGGAGTTAACGCTGTCTTACAAGGCCCTCAACGACGCATGCCCTTACTCCAAGTTCGCACACTTAACTGCTAACCAAGCCATCTTGGAAGCCACCGAAGACGCCTCCAACATCCACATCCTGGACTTCGGCATCGTCCAAGGGATTCAGTGGGCCGCGCTCTTGCAGGCTTTCGCCACTCGCTCTTCCGGAAAGCCCAATAAGATCAAAATCTCTGGAATTCCCGCCATCGCTCTTGGGGCCTCGCCCGGCCCATCTCTCTCCGCCACCGGCAACCGCCTCTCCGAGTTCGCCAAACTCCTCGACCTGAACTTCGAGTTCACGCCTATTCTCACTCCCATTCACGACCTCGACCGCAACAGCTTTTGCATTGACCCTGACGAGGCCCTCGCCGTGAACTTCATGCTCCAGTTGTACAACCTCCTTGACGAGCCTCCCACCGCCGTGGACACCGCCCTCCGGTTGGCGAAATCTCTCAACCCCAAAATCGTCACCCTCGGCGAGTACGAGGCGAGCCTGACACGTGTCGGCTTTGTGAACCGCTTCAAGACCGCGTTCAGGTACTTCTCCGCTGTGTTCGAATCGCTGGACCCTAACTTGTCCGCGGACTCGCCGGAGAGGTTTCAGGTGGAGAGTCTTCTCCTGGGGCGGCGAATCGACGCGGTGATTGGGCCTGGGCCGGTGAGGGAGAGTATGGAGGATAGGGAGCAGTGGAGGGTTCTGATGGAGCGTGCTGGGTTTGAGTCTGTGAGTCTGAGTCATTATGCAGTTAGTCAGGCGAAGATACTTCTCTGGAATTACGGTTACAGCTCTTTGTTTTCGCTGCTTGAATCCACGCCGCCGGGCTTCTTGTCTCTCGCTTGGAAAGATGTTCCTCTCTTGACTCTCTCCTCGTGGCGCTAA 1659 0.5871 MAYMCADSGNLMAIAQQVIKQKQQQEQQQQKQHQQHHHQHHHHHHHHHHQHHLNPLSLHPIPWNNTPTLGYPLHPTDFPDPFQPDPPFHFPDTQSAPAPAPFRFSDFDSDDWMDSLIAAADTPSWHTNADFPFPSDLNRLIFPTSDTATATAATSLPLQPTPPPPPQEPLDAGVSSESDSAHPLLKALTECASLVESEPDQAAESLARLRKSVSQHGNPTQRVGFYFCEALSRKIWAEKEKGEPKSATTTTSEELTLSYKALNDACPYSKFAHLTANQAILEATEDASNIHILDFGIVQGIQWAALLQAFATRSSGKPNKIKISGIPAIALGASPGPSLSATGNRLSEFAKLLDLNFEFTPILTPIHDLDRNSFCIDPDEALAVNFMLQLYNLLDEPPTAVDTALRLAKSLNPKIVTLGEYEASLTRVGFVNRFKTAFRYFSAVFESLDPNLSADSPERFQVESLLLGRRIDAVIGPGPVRESMEDREQWRVLMERAGFESVSLSHYAVSQAKILLWNYGYSSLFSLLESTPPGFLSLAWKDVPLLTLSSWR 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02774 552 Pfam GRAS domain family 185 552 IPR005202 -
Viun11g02774 552 MobiDBLite consensus disorder prediction 154 179 - -
Viun11g02774 552 Coils Coil 12 35 - -
Viun11g02774 552 MobiDBLite consensus disorder prediction 72 99 - -
Viun11g02774 552 ProSiteProfiles GRAS family profile. 175 552 IPR005202 -
Viun11g02774 552 MobiDBLite consensus disorder prediction 77 94 - -
Viun11g02774 552 MobiDBLite consensus disorder prediction 18 60 - -
Viun11g02774 552 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 153 546 IPR005202 -
Viun11g02774 552 MobiDBLite consensus disorder prediction 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02774 Viun-Chr11 40171697 40174236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02774 1 552 GRAS Transcription Factor Family AT5G66770 56.053 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun11g02774 GRAS 1.6e-103 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02774 - - vum:124844288 943.725