Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02748 ATGGAGATAGAAGCAGCCACTGCTAAAGAAAAGGGTGTTGGTGAGGGTGGAGAAACGATGGAAGTTTCAGAAAATAGAGGAATGTATCTGGTGTGGGAAGATTTAACTGTTGTGGTTCCAAATTTTGGAGATGGACACACTAAGAGATTGCTTAATGGGTTGAGTGGATATGCTGAACCTAACAAAATCATGGCTATCATGGGTCCTTCTGGCTCTGGAAAATCTACTCTTCTTGATGCTTTAGCAGGAAGACTCTCCAGAAACGTTATTATGTCTGGAAATGTGTTTGTAAATGGAAAGAAGAGGAGATTGGACTATGGTGGTGCTGCTTATGTGACCCAAGAAGACACAATGCTGGGAACTCTGACAGTGAGAGAGACGATATATTACTCAGCGAATCTAAGGCTTCCAGGGAGCATGAGGAAAGAAGAGGTGAATGAGATAATAGAAGGAACAATTATGGAAATGGGTCTTCAAGAATGTGCAGATCGGATAATAGGGAATTGGCATTTGAGAGGTATAAGCGGTGGAGAGAAGAGAAGACTAAGCATTGCTCTTGAAATCCTCACAAGGCCAACTCTCTTGTTCCTTGATGAACCCACCACTGGTCTCGACAGTGCCTCTGCATATTTTGTTGCTCAAACTCTCAGAAATTTGGCTCATGATGCAAAAACTGTTATCTCCTCTATACACCAACCAAGTAGTGAGGTTTTTGCACTCTTTGATAATCTCTTTCTTCTCTCTGGGGGTCAAACAATCTACTTTGGACCTGCACAAAAGGCAACTCAGTTCTTTGCTAAAGCTGGATTCCCATGTCCAAGTAGAAGAAACCCTTCCGATCATTTCCTTCGTTGTATCAACTCAGACTTCGACGCTGTCACAGCCACAATCACGGCCTCCCAAACGAGACAAGAAGAAGTATCATTATCAACTGCAGCAATCAAAGCAACACTCATAGAAAAATACCGATGGTCTGAGTATGCAACCACTGCAAGAGAAAGAATCAAGGAAATATCAAACATAGAAGGACATGATTTTGAAAGTAAAAGGAAATGCGAAGCCACATGGTGGAAGGAACTATCAATGCTGACTCAGAGATCTTGCCTGAACATGTCCAGAGATTTGGGATACTACTGGATAAGGATAACTACCTATGTCGCCTTATCTTTGTGCGTTGGAACAATCTTCCATGATGTCGGAACGAGTTACAGAGCCATTTTTGCCAGAGGATCATGTGCCGGTTTTATCTCAGGTTTCATGACCTTCATGTCCATTGGGAGCTTCCCTTCTTTCTTAGAAGAAATGAAGGTCTTCTACAAAGAAAGAATGGGTGGTTATTATGGCGTTGGAGTCTACATTCTCTCAAATTTTCTCTCTTCCTTTCCGTTTTTGGCAGTGATGTCCACTGCTACAGGGGCTATAAGCTATTATATGGTTAAGTCTCGTTCAGAATTTTCACACTTTTTGTATATCACTCTTGATCTTATGGGCTGCATTGCGGTTGTGGAGAGCTCCATGATGGTTATAGCTTCACTGGTTCCCAACTTCCTCATGGGATTGACAATTGGAGCAGGATATATTGGTCTTATGATGATGACTTCTGGCTTTTTCCGTCCACTCCCTGATCTTCCCAAAATCTTCTGGCGTTACCCAATATCATACATCAATTATGGCGCATGGGGATTACAGGGAGCTTTCAAGAATGACTTGATTGGAATGGAGTTTGATCCCTTAGAACCTGGTGACCCGAAACTGAAAGGAGAATTCATCCTCAAAACCATGCTTGGCATTCATATTGATAATTCAAAGTGGTGGGACATAGCTGCAATCATGATCCTCCTCATATCGCTTAGAGTTCTTTTCTTTTTCATTCTGAAATTCAAGGAGAGAGCAGCACCTTTTCTTTATAGCATCTACGCCAGGCAAACTCTGGAACGTATAAAAAAGCGACCTTCGTTCAGGAAAGTACCATCTTTCGCTTCCAAACGCCACCAATCACTGCATCCCTTGTCTCCTCCAGAGGATCTCAACTCGCTCATCCATTAG 2046 0.4247 MEIEAATAKEKGVGEGGETMEVSENRGMYLVWEDLTVVVPNFGDGHTKRLLNGLSGYAEPNKIMAIMGPSGSGKSTLLDALAGRLSRNVIMSGNVFVNGKKRRLDYGGAAYVTQEDTMLGTLTVRETIYYSANLRLPGSMRKEEVNEIIEGTIMEMGLQECADRIIGNWHLRGISGGEKRRLSIALEILTRPTLLFLDEPTTGLDSASAYFVAQTLRNLAHDAKTVISSIHQPSSEVFALFDNLFLLSGGQTIYFGPAQKATQFFAKAGFPCPSRRNPSDHFLRCINSDFDAVTATITASQTRQEEVSLSTAAIKATLIEKYRWSEYATTARERIKEISNIEGHDFESKRKCEATWWKELSMLTQRSCLNMSRDLGYYWIRITTYVALSLCVGTIFHDVGTSYRAIFARGSCAGFISGFMTFMSIGSFPSFLEEMKVFYKERMGGYYGVGVYILSNFLSSFPFLAVMSTATGAISYYMVKSRSEFSHFLYITLDLMGCIAVVESSMMVIASLVPNFLMGLTIGAGYIGLMMMTSGFFRPLPDLPKIFWRYPISYINYGAWGLQGAFKNDLIGMEFDPLEPGDPKLKGEFILKTMLGIHIDNSKWWDIAAIMILLISLRVLFFFILKFKERAAPFLYSIYARQTLERIKKRPSFRKVPSFASKRHQSLHPLSPPEDLNSLIH 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02748 681 CDD ABCG_EPDR 27 256 - -
Viun11g02748 681 FunFam ABC transporter G family member 11 24 268 - -
Viun11g02748 681 Pfam ABC-2 type transporter 360 568 IPR013525 GO:0016020|GO:0140359
Viun11g02748 681 ProSitePatterns ABC transporters family signature. 174 188 IPR017871 GO:0005524|GO:0016887
Viun11g02748 681 SMART AAA_5 60 250 IPR003593 GO:0016887
Viun11g02748 681 Pfam ABC-2 type transporter 231 289 IPR043926 GO:0140359
Viun11g02748 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 23 650 - -
Viun11g02748 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 266 IPR027417 -
Viun11g02748 681 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 30 274 IPR003439 GO:0005524
Viun11g02748 681 Pfam ABC transporter 51 201 IPR003439 GO:0005524
Viun11g02748 681 Gene3D - 18 269 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02748 Viun-Chr11 40004743 40010645 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02748 49 245 Calmodulin-binding Proteins AT2G36910 27.982 1.70e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02748 K05681 - gmx:100806806 1149.81