Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02745 ATGGCATACATGTTTGCAGCTGTAACTCTCACATTAATTTCCCTTACTTGCCACCTGTGTGCCTCTGATCTGTGCAACCTCAACCCAATCAATAATAACTCTTCTTCTTCTTCATTCATTCATTCATTCATCTTCTCTCTCTCCATAAGTTTCTCTAATTCAGTTGATGACAGCATTAATGGTCAAACTTCCATACCTATCACCATGGAGATTCAAGCAGCAGCAGCAGCAGCAGCCGCAGCAGCCACCGATCGGAACAAAGGCTTGAACTGGGGTGGTGCTGCTGCTACTGAGACTCAGAGGGATCTTCCATACGCAGGCTTTGACAGAGGAAGCTTCTTGGCTTGGCAAGATCTCAGAGTTGTGCTTCCAAACTTTGGAAAAGGACCCACCAAGCGATTGCTCAATGGTCTCAATGGCTATGCTGAACCTGGCCGAATCATGGCCATCATGGGTCCTTCTGGTTCTGGAAAATCTACCCTCCTTGATGCACTTGCAGGTAGACTCTCAAAAAATGTAGTTATGACAGGAAATGTTCTTCTAAATGGGAAGAAAAAAGGCCTAGGTTACGGCGGTGTTGCTTACGTAACACAAGAGGATGTGTTGCTGGGAACTCTCACTGTGAAGGAAACTGTATCTTACTCAGCTCATCTACGTCTTCCAACATCAATGAGCAAAGAAGAAATCAACAACCTGGTGGATGGAACAATCATAGAAATGGGTCTCCAAGATTGTGCTGATAGATTGATCGGTAACTGGCACTTGAGAGGAATAAGTGGAGGCGAGAAGAAGAGGCTTAGCATTGCACTTGAGATCCTTACAATGCCTCGTTTACTGTTTCTTGATGAACCCACCAGTGGCCTTGACAGTGCCTCTGCATTTTTTGTCGTTCAAACTCTCAGAAATGTTGCTCGTGACGGAAGAACTGTTATCTCTTCCATTCACCAGCCCAGCAGTGAAGTCTTTACTCTCTTTGATGACCTTTTCTTGCTCTCTGGCGGTGAAACAGTTTATTTTGGAGAAGCAAAATCTGCAATTGAGTTTTTTGCTGAAGCTGGTTTCCCTTGTCCACGTAAAAGAAATCCTTCTGATCACTTCCTACGATGCATCAATTCTGATTTCGACATTGTTACAGCTACGTTGAAGGGATCTCAGAGAATTCATGATGTTCCAAATTCAGCAGATCCTTTCATGAATTTGGCTACAGCAGAGATCAAGTCAATGCTAGTTGAGAAGTATAGGCGTTCAACATATGCCAGAAGAGCAAAGACCAGAATTCAAGAACTATCTACAGATGAAGGGCTTGAACCTCAGCCACAAAATGGAAGTCAAGCTAGTTGGTGGAAGCAACTCTCAACTCTGACAAAAAGATCATTTGTGAACATGTGCAGAGATGTGGGGTACTACTGGTTGAGGATCATAATTTACATCATTGTGTCCATATGTGTGGGAACAGTTTATTTTGACATTGGCTACAGCTACACTTCCATTCTCGCCCGTGGTGCCTGTGGTGCATTCATATCAGGTTTTATGACATTCATGTCTATTGGAGGCTTTCCATCATTCATCGAAGAAATGAAGGTATTTTATCGAGAAAGGCTGAATGGATACTATGGAGTTGCAGCATATATTTTAGCCAATTTTCTTTCTTCTTTCCCATTCTTGGTTGCTATTGCTCTTACTTCTAGCATCATCACCTATAACATGGTGAAATTCAGGCCAGGGATAAGCCACTTTGTGTTTTTCACCATCAACATCTACAGCTGCATCTCCGTGATAGAGAGCCTCATGATGGTTGTGGCTTCACTTGTTCCAAATTTCCTCATGGGAATAATTACAGGGGCTGGAATTATAGGAATCATGATGATGACCTCAGGATTCTTCAGGTTGCTGTCTGATCTTCCAAAACCAGTTTGGCGCTACCCGATTTCATATATCAGTTATGGTTCATGGGCAATACAGGGTTCCTACAAGAATGACTTGCTTGGACTTGAGTTTGAGCCTCTGATACCTGGTGACCAAAAACTGACCGGAGAATACGTGATCACACACATGTTAGGCATTGAATTGAACCATTCAAAGTGGTGGGACTTGGCAGCTCTATTTGTGATTCTCATAGTTTACAGAGTTCTGTTCTTCACTGTTCTGAAGTTCAAGGAGAGAGCATCACCATTGTTTCAGACACTTTATGCAAAGAGAACAATCCAACAGCTTGAAAAGAGACCCTCTTTCAGAAAGATGCCATCTTTCCCTTCACAGAGGCATCAACCACTCCATTCACTTTCTTCCCAAGATGGTCTTGATTCTCCACTCAACTAA 2319 0.4299 MAYMFAAVTLTLISLTCHLCASDLCNLNPINNNSSSSSFIHSFIFSLSISFSNSVDDSINGQTSIPITMEIQAAAAAAAAAATDRNKGLNWGGAAATETQRDLPYAGFDRGSFLAWQDLRVVLPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDALAGRLSKNVVMTGNVLLNGKKKGLGYGGVAYVTQEDVLLGTLTVKETVSYSAHLRLPTSMSKEEINNLVDGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTMPRLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFTLFDDLFLLSGGETVYFGEAKSAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDIVTATLKGSQRIHDVPNSADPFMNLATAEIKSMLVEKYRRSTYARRAKTRIQELSTDEGLEPQPQNGSQASWWKQLSTLTKRSFVNMCRDVGYYWLRIIIYIIVSICVGTVYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYILANFLSSFPFLVAIALTSSIITYNMVKFRPGISHFVFFTINIYSCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGSWAIQGSYKNDLLGLEFEPLIPGDQKLTGEYVITHMLGIELNHSKWWDLAALFVILIVYRVLFFTVLKFKERASPLFQTLYAKRTIQQLEKRPSFRKMPSFPSQRHQPLHSLSSQDGLDSPLN 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02745 772 Pfam ABC-2 type transporter 315 390 IPR043926 GO:0140359
Viun11g02745 772 ProSitePatterns ABC transporters family signature. 258 272 IPR017871 GO:0005524|GO:0016887
Viun11g02745 772 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 100 741 - -
Viun11g02745 772 Gene3D - 115 352 IPR027417 -
Viun11g02745 772 CDD ABCG_EPDR 111 340 - -
Viun11g02745 772 MobiDBLite consensus disorder prediction 740 772 - -
Viun11g02745 772 Pfam ABC transporter 135 286 IPR003439 GO:0005524
Viun11g02745 772 FunFam ABC transporter G family member 11 108 352 - -
Viun11g02745 772 MobiDBLite consensus disorder prediction 749 772 - -
Viun11g02745 772 Pfam ABC-2 type transporter 450 659 IPR013525 GO:0016020|GO:0140359
Viun11g02745 772 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 130 350 IPR027417 -
Viun11g02745 772 SMART AAA_5 144 315 IPR003593 GO:0016887
Viun11g02745 772 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 114 358 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02745 Viun-Chr11 39980664 39986675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02745 130 327 Calmodulin-binding Proteins AT2G36910 30.144 1.32e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02745 K05681 - gmx:100777598 1250.34