Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02744 ATGGCATACATGTTTGCAGCTGTAACTCTCACATTAATTTCCCTTACTTGCCACCTGTGTGCCTCTGATCTGTGCAACCTCAACCCAATCAATAATAACTCTTCTTCTTCTTCATTCATTCATTCATTCATCTTCTCTCTCTCCATAAGTTTCTCTAATTCAGTTGATGACAGCATTAATGTTCCAACCTCTTTAGGTCAAACTTCCATACCTATCACCATGGAGATTCAAGCAGCAGCAGCAGCAGCAGCCGCAGCAGCCACCGATCGGAACAAAGGCTTGAACTGGGGTGGTGCTGCTGCTACTGAGACTCAGAGGGATCTTCCATACGCAGGCTTTGACAGAGGAAGCTTCTTGGCTTGGCAAGATCTCAGAGTTGTGCTTCCAAACTTTGGAAAAGGACCCACCAAGCGATTGCTCAATGGTCTCAATGGCTATGCTGAACCTGGCCGAATCATGGCCATCATGGGTCCTTCTGGTTCTGGAAAATCTACCCTCCTTGATGCACTTGCAGGTAGACTCTCAAAAAATGTAGTTATGACAGGAAATGTTCTTCTAAATGGGAAGAAAAAAGGCCTAGGTTACGGCGGTGTTGCTTACGTAACACAAGAGGATGTGTTGCTGGGAACTCTCACTGTGAAGGAAACTGTATCTTACTCAGCTCATCTACGTCTTCCAACATCAATGAGCAAAGAAGAAATCAACAACCTGGTGGATGGAACAATCATAGAAATGGGTCTCCAAGATTGTGCTGATAGATTGATCGGTAACTGGCACTTGAGAGGAATAAGTGGAGGCGAGAAGAAGAGGCTTAGCATTGCACTTGAGATCCTTACAATGCCTCGTTTACTGTTTCTTGATGAACCCACCAGTGGCCTTGACAGTGCCTCTGCATTTTTTGTCGTTCAAACTCTCAGAAATGTTGCTCGTGACGGAAGAACTGTTATCTCTTCCATTCACCAGCCCAGCAGTGAAGTCTTTACTCTCTTTGATGACCTTTTCTTGCTCTCTGGCGGTGAAACAGTTTATTTTGGAGAAGCAAAATCTGCAATTGAGTTTTTTGCTGAAGCTGGTTTCCCTTGTCCACGTAAAAGAAATCCTTCTGATCACTTCCTACGATGCATCAATTCTGATTTCGACATTGTTACAGCTACGTTGAAGGGATCTCAGAGAATTCATGATGTTCCAAATTCAGCAGATCCTTTCATGAATTTGGCTACAGCAGAGATCAAGTCAATGCTAGTTGAGAAGTATAGGCGTTCAACATATGCCAGAAGAGCAAAGACCAGAATTCAAGAACTATCTACAGATGAAGGGCTTGAACCTCAGCCACAAAATGGAAGTCAAGCTAGTTGGTGGAAGCAACTCTCAACTCTGACAAAAAGATCATTTGTGAACATGTGCAGAGATGTGGGGTACTACTGGTTGAGGATCATAATTTACATCATTGTGTCCATATGTGTGGGAACAGTTTATTTTGACATTGGCTACAGCTACACTTCCATTCTCGCCCGTGGTGCCTGTGGTGCATTCATATCAGGTTTTATGACATTCATGTCTATTGGAGGCTTTCCATCATTCATCGAAGAAATGAAGGTATTTTATCGAGAAAGGCTGAATGGATACTATGGAGTTGCAGCATATATTTTAGCCAATTTTCTTTCTTCTTTCCCATTCTTGGTTGCTATTGCTCTTACTTCTAGCATCATCACCTATAACATGGTGAAATTCAGGCCAGGGATAAGCCACTTTGTGTTTTTCACCATCAACATCTACAGCTGCATCTCCGTGATAGAGAGCCTCATGATGGTTGTGGCTTCACTTGTTCCAAATTTCCTCATGGGAATAATTACAGGGGCTGGAATTATAGGAATCATGATGATGACCTCAGGATTCTTCAGGTTGCTGTCTGATCTTCCAAAACCAGTTTGGCGCTACCCGATTTCATATATCAGTTATGGTTCATGGGCAATACAGGGTTCCTACAAGAATGACTTGCTTGGACTTGAGTTTGAGCCTCTGATACCTGGTGACCAAAAACTGACCGGAGAATACGTGATCACACACATGTTAGGCATTGAATTGAACCATTCAAAGTGGTGGGACTTGGCAGCTCTATTTGTGATTCTCATAGTTTACAGAGTTCTGTTCTTCACTGTTCTGAAGTTCAAGGAGAGAGCATCACCATTGTTTCAGACACTTTATGCAAAGAGAACAATCCAACAGCTTGAAAAGAGACCCTCTTTCAGAAAGATGCCATCTTTCCCTTCACAGAGGCATCAACCACTCCATTCACTTTCTTCCCAAGATGGTCTTGATTCTCCACTCAACTAA 2334 0.4297 MAYMFAAVTLTLISLTCHLCASDLCNLNPINNNSSSSSFIHSFIFSLSISFSNSVDDSINVPTSLGQTSIPITMEIQAAAAAAAAAATDRNKGLNWGGAAATETQRDLPYAGFDRGSFLAWQDLRVVLPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDALAGRLSKNVVMTGNVLLNGKKKGLGYGGVAYVTQEDVLLGTLTVKETVSYSAHLRLPTSMSKEEINNLVDGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTMPRLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFTLFDDLFLLSGGETVYFGEAKSAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDIVTATLKGSQRIHDVPNSADPFMNLATAEIKSMLVEKYRRSTYARRAKTRIQELSTDEGLEPQPQNGSQASWWKQLSTLTKRSFVNMCRDVGYYWLRIIIYIIVSICVGTVYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYILANFLSSFPFLVAIALTSSIITYNMVKFRPGISHFVFFTINIYSCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGSWAIQGSYKNDLLGLEFEPLIPGDQKLTGEYVITHMLGIELNHSKWWDLAALFVILIVYRVLFFTVLKFKERASPLFQTLYAKRTIQQLEKRPSFRKMPSFPSQRHQPLHSLSSQDGLDSPLN 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02744 777 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 105 746 - -
Viun11g02744 777 Pfam ABC-2 type transporter 320 395 IPR043926 GO:0140359
Viun11g02744 777 Pfam ABC-2 type transporter 455 664 IPR013525 GO:0016020|GO:0140359
Viun11g02744 777 CDD ABCG_EPDR 116 345 - -
Viun11g02744 777 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 355 IPR027417 -
Viun11g02744 777 SMART AAA_5 149 320 IPR003593 GO:0016887
Viun11g02744 777 MobiDBLite consensus disorder prediction 745 777 - -
Viun11g02744 777 Pfam ABC transporter 140 291 IPR003439 GO:0005524
Viun11g02744 777 MobiDBLite consensus disorder prediction 754 777 - -
Viun11g02744 777 Gene3D - 120 357 IPR027417 -
Viun11g02744 777 ProSitePatterns ABC transporters family signature. 263 277 IPR017871 GO:0005524|GO:0016887
Viun11g02744 777 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 119 363 IPR003439 GO:0005524
Viun11g02744 777 FunFam ABC transporter G family member 11 113 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02744 Viun-Chr11 39980664 39986960 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02744 135 332 Calmodulin-binding Proteins AT2G36910 30.144 1.36e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02744 K05681 - gmx:100777598 1250.34