Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02711 ATGGCCACCATGGAAGACATGAGCATGAGTGTGGAAACTGCACTTCCTGGCTTCCGATTCCACCCCACAGAGGAAGAGCTTCTCGATTTCTATCTTAAGAACATGGTTGTCGGAAAGAAACTCCGGTACGACGTTATCGGTTTCCTCAACATCTATCACCATGATCCCTGGGACTTACCTGATTTGGCTAAGGTTGGGGAGAGAGAATGGTACTTCTTCGTGCCGAGGGACAAGAAGCACGGAAGCGGAGGACGGCCGAACCGGACCACCGAGAAAGGGTTCTGGAAAGCGACCGGTTCGGACCGGAAAATAGTGACTCTGTCTGATCCGAAACGCATCATCGGGTTAAGGAAGACCCTGGTTTTCTACATGGGAAGAGCTCCCAGCGGACGCAAAACCGATTGGGTGATGAATGAGTACCGTTTACCCGACAACTGCAAACTACCCAAGGAAATAGTGTTGTGCAAGATATATCGAAAGGCAACATCGTTGAAAGTGTTGGAGGAAAGGGCAGAGAGAGAGATGAAGCAAATGGTGGGTTCCCCTGCTTCTCCTCCTTCTTCGACGGACACCATGTCCTTCGGCAGTCCACAGGAAGAGGCGAACGTGTCCTTGCCTCTGCCCTTGTTGCAGCATGTTCTTAAGAAAGAGTCTGAATCTGAAGAAATAATGGGGTGTGTAGTGCCTAAACAAGAAAAAACAAGCACCCAATTGGGTTTGAAGGACAATAACAACAACAACAAGGGTAGCAGTTGTGGGACATCTTCCCTACAAATGCCCTTCGGGAAGGACAATCTTCCGGACCTGCAACTTCCGATGTTAACAGATTGGACCCAAGATACCTTCTGGGCTCAGTTGAACAGTCCATGGCTCCAAAACTTAACTCCTTCCAACATCTTAAACTTCTACTGA 912 0.489 MATMEDMSMSVETALPGFRFHPTEEELLDFYLKNMVVGKKLRYDVIGFLNIYHHDPWDLPDLAKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYMGRAPSGRKTDWVMNEYRLPDNCKLPKEIVLCKIYRKATSLKVLEERAEREMKQMVGSPASPPSSTDTMSFGSPQEEANVSLPLPLLQHVLKKESESEEIMGCVVPKQEKTSTQLGLKDNNNNNKGSSCGTSSLQMPFGKDNLPDLQLPMLTDWTQDTFWAQLNSPWLQNLTPSNILNFY 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02711 303 MobiDBLite consensus disorder prediction 181 198 - -
Viun11g02711 303 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 232 - -
Viun11g02711 303 SUPERFAMILY NAC domain 4 160 IPR036093 GO:0003677|GO:0006355
Viun11g02711 303 Gene3D NAC domain 23 164 IPR036093 GO:0003677|GO:0006355
Viun11g02711 303 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Viun11g02711 303 FunFam NAC domain-containing protein 67-like 23 164 - -
Viun11g02711 303 MobiDBLite consensus disorder prediction 234 257 - -
Viun11g02711 303 ProSiteProfiles NAC domain profile. 14 160 IPR003441 GO:0003677|GO:0006355
Viun11g02711 303 MobiDBLite consensus disorder prediction 176 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02711 Viun-Chr11 39749198 39750659 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02711 9 303 NAC Transcription Factor Family AT2G17040 57.807 1.62e-116 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun11g02711 NAM 1.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02711 - - gmx:732555 514.612